Job Description P0AFG3 Confidence 99.96% Date Wed Jan 25 15:20:33 GMT 2012 Rank 29 Aligned Residues 187 % Identity 17% Template d2ozlb1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 1.90

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		590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	D	W	G	G	A	E	N	L	A	Y	A	T	L	V	D	E	G	I	P	V	R	L	S	G	E	D	S	G	R	G	T	F	F	H	R	H	A	V	I	H	N	Q	S	N	G	S	T	Y	T	P	L	Q	H	I	H	N	G	Q	G	A	F	R	V	W	D	S	V	L	S	E	E	A	V	L	A	F	E	Y
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	T	V	R	D	A	I	N	Q	G	M	D	E	E	L	E	R	D	E	K	V	F	L	L	G	E	E	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	D	G	A	Y	K	V	S	R	G	L	W	K	K	Y	G	D	K	R	I	I	D	T	P	I	S	E	M	G	F	A	G	I	A	V
Template Known Secondary structure																					T	T						T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T			T	T	S	T	T	T	T							T	T	T						S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.															.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.			.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.
Query SS confidence																																													.	.
Query Sequence		G	Y	A	T	A	E	P	R	T	L	T	I	W	E	A	Q	F	G	D	F	A	N	G	A	Q	V	V	I	D	Q	F	I	S	S	G	E	Q	K	W	G	R	M	C	.	.	G	L	V	M	L	L	P	H	G	Y	E	G	Q	G	P	E	H	S	S	A	R	L	E	R	Y	L	Q	L	C	A	E	Q	N	M	Q
Query Conservation																																													.	.
Alig confidence													.	.																															.	.																											.	.
Template Conservation													.	.																																																											.	.
Template Sequence		G	A	A	M	A	G	L	R	P	I	C	.	.	E	F	M	T	F	N	F	S	M	Q	A	I	D	Q	V	I	N	S	A	A	K	T	Y	Y	M	S	G	G	L	Q	P	V	P	I	V	F	R	G	P	N	G	A	S	A	G	V	A	A	Q	H	S	Q	C	F	A	A	W	Y	.	.	G	H	C	P	G	L	K
Template Known Secondary structure						T	T						.	.			S	S	G	G	G	G	G	G	G						T	T	T	T	T					T	T	S	S												S			S	S			G	G	G									.	.		T	S	T	T
Template Predicted Secondary structure													.	.																																																											.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.
		748	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	V	P	S	T	P	A	Q	V	Y	H	M	L	R	R	Q	A	L	R	G	M	R	R	P	L	V	V	M	S	P	K	S	L	L	R	H	P	L	A	V	S	S	L	E	E	L	A	N
Query Conservation
Alig confidence																							.	.
Template Conservation																							.	.
Template Sequence		V	V	S	P	W	N	S	E	D	A	K	G	L	I	K	S	A	I	R	D	N	.	.	N	P	V	V	V	L	E	N	E	L	M	Y	G	V	P	F	E	F	P	P	E	A	Q	S	K	D
Template Known Secondary structure							S														S	S	.	.	S												T											S	T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions