Job Description P0AFG3 Confidence 100.00% Date Wed Jan 25 15:20:33 GMT 2012 Rank 5 Aligned Residues 316 % Identity 18% Template d2ozla1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase PP module Resolution 1.90

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		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.
Query SS confidence																																						.	.	.	.
Query Sequence		A	T	F	N	S	E	E	K	K	R	F	L	S	E	L	T	A	A	E	G	L	E	R	Y	L	G	A	K	F	P	G	A	K	R	F	S	.	.	.	.	L	E	G	G	D	A	L	I	P	M	L	K	E	M	I	R	H	A	G	N	S	G	T	R	E	V	V	L	G	M	A	H	R	G	R	L	N	V	L	V
Query Conservation																																						.	.	.	.
Alig confidence																																						.	.	.	.												.	.	.	.	.	.												.
Template Conservation																																																					.	.	.	.	.	.												.
Template Sequence		T	V	L	T	R	E	D	G	L	K	Y	Y	R	M	M	Q	T	V	R	R	M	E	L	K	A	D	Q	L	Y	K	Q	K	I	I	R	G	F	C	H	L	C	D	G	Q	E	A	C	C	V	G	L	.	.	.	.	.	.	E	A	G	I	N	P	T	D	H	L	I	.	T	A	Y	R	A	H	G	F	T	F	T
Template Known Secondary structure																																T	T	S	S		S						T	T									.	.	.	.	.	.			T	S		T	T	S				.			S
Template Predicted Secondary structure																																																					.	.	.	.	.	.												.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.							.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	L	G	K	K	P	Q	D	L	F	D	E	F	A	G	K	H	K	E	H	L	G	T	G	D	V	K	Y	H	M	G	F	S	S	D	F	Q	T	D	G	G	L	V	H	L	A	L	A	F	N	P	S	H	L	E	I	V	S	P	V	V	I	G	S	V	R	A	R	L	D	R	L	D	E	P	S	S	N	K
Query Conservation
Alig confidence			.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Conservation			.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template Sequence		R	.	.	G	L	S	V	R	E	I	L	A	E	L	T	G	R	K	G	G	C	A	K	G	K	G	G	S	M	H	M	Y	A	K	N	.	.	.	.	.	.	.	.	.	.	.	.	F	Y	G	G	N	G	I	V	G	A	Q	V	P	L	G	A	G	I	A	L	A	C	K	Y	N	G	K	D	E	.	.	.	.
Template Known Secondary structure		T	.	.	T											T	T		T	T	S	T	T	T	T	S	S		T	T				B	T	T	.	.	.	.	.	.	.	.	.	.	.	.	B						S	T	T	T																T				.	.	.	.
Template Predicted Secondary structure			.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.
Template SS confidence
		98			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130													.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	P	I	T	I	H	G	D	A	A	V	T	G	Q	G	V	V	Q	E	T	L	N	M	S	K	A	R	G	Y	E	V	G	G	T	V	R	I	V	I	N	N	Q	V	G	F	T	T	S	N	P	L	D	A	R	S	T	P	Y	C	T	D	I	G	K	M	V	Q	A	P	I	F	H	V	N	A	D	D	P	E
Query Conservation
Alig confidence		.													.																			.	.	.																										.	.	.
Template Conservation		.													.																			.	.	.																										.	.	.
Template Sequence		.	V	C	L	T	L	Y	G	D	G	A	A	N	.	Q	G	Q	I	F	E	A	Y	N	M	A	A	L	W	K	L	P	C	.	.	.	I	F	I	C	E	N	N	R	Y	G	M	G	T	S	V	E	R	A	A	A	S	T	D	Y	Y	.	.	.	K	R	G	D	F	I	P	G	L	R	V	D	G	M	D	I	L
Template Known Secondary structure		.								T	T	G	G	G	.														T	T				.	.	.								S			T	T								S				G	G	.	.	.	G	T	T	T	T	S							T	T
Template Predicted Secondary structure		.													.																			.	.	.																										.	.	.
Template SS confidence
			160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.		.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		A	V	A	F	V	T	R	L	A	L	D	F	R	N	T	F	K	R	D	V	F	I	D	L	V	C	Y	R	R	H	G	H	N	E	A	D	E	P	S	.	A	T	Q	P	L	M	Y	Q	K	I	K	K	H	P	T	P	R	K	I	Y	A	D	K	L	E	Q	E	K	V	A	T	L	E	D	A	T	E	M	V	N
Query Conservation																																									.
Alig confidence																																									.
Template Conservation
Template Sequence		C	V	R	E	A	T	R	F	A	A	A	Y	C	R	S	G	K	G	P	I	L	M	E	L	Q	T	Y	R	Y	H	G	H	E	M	S	D	P	G	V	S	Y	R	T	R	E	E	I	Q	E	V	R	S	K	S	D	P	I	M	L	L	K	D	R	M	V	N	S	N	L	A	S	V	E	E	L	K	E	I	D	V
Template Known Secondary structure																T	T													S	S		S	S	T	T			S		S	S	S																									T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	R	D	A	L	D	A	G	D	C	V	V	A	E	W	R	P	M	N	M	H	S	F	T	W	S	P	Y	L	N	H	E	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	V	R	K	E	I	E	D	A	A	Q	F	A	T	A	D	P	E	P	P	L	E	E	L	G	Y	H	I	Y	S	S	D	P	P
Template Known Secondary structure																	S					G	G	G	T	T		S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions