Job Description P0AFG3 Confidence 81.63% Date Wed Jan 25 15:20:33 GMT 2012 Rank 95 Aligned Residues 161 % Identity 18% Template d2ieaa1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like Pyr module Resolution 1.85

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.				610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		A	G	E	K	L	F	D	W	G	G	A	E	N	L	A	Y	A	T	L	V	D	E	G	I	.	.	.	P	V	R	L	S	G	E	D	S	G	R	G	T	F	F	H	R	H	A	V	I	H	N	Q	S	N	G	S	T	Y	T	P	L	Q	H	I	H	N	G	Q	G	A	F	R	V	W	D	S	V	L	S	E	E
Query Conservation																										.	.	.
Alig confidence																										.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Q	S	K	E	I	S	T	T	I	A	F	V	R	A	L	N	V	M	L	K	N	K	S	I	K	D	R	L	V	P	I	I	A	D	E	A	R	T	F	.	.	.	.	.	.	.	.	.	.	.	G	M	E	G	L	F	R	Q	I	G	I	Y	S	P	E	D	E	K	G	Q	I	L	Q	E	G	I	N	E	L
Template Known Secondary structure				S	S		B														T	T		T	T	T	G	G	G						S	S		S	G	G	G	.	.	.	.	.	.	.	.	.	.	.	T										B	B				B	T	T			B					S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.												.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
		663	.	.	.	.	.	.	670	.	.	.	.							.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.				.	.	.	.	.	.	.	.	730	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																																																.	.	.
Query SS confidence														.	.	.	.	.	.																																																.	.	.
Query Sequence		A	V	L	A	F	E	Y	G	Y	A	T	A	.	.	.	.	.	.	E	P	R	T	L	T	I	W	E	A	Q	F	G	D	F	A	N	G	A	Q	V	V	I	D	Q	F	I	S	S	G	E	Q	K	W	G	R	M	C	G	L	V	M	L	L	P	H	G	.	.	.	Y	E	G	Q	G	P	E	H	S	S	A	R
Query Conservation														.	.	.	.	.	.																																																.	.	.
Alig confidence														.	.	.	.	.	.													.	.	.	.	.																	.	.	.												.	.	.											.	.
Template Conservation																																.	.	.	.	.																	.	.	.																									.	.
Template Sequence		G	A	G	C	S	W	L	A	A	A	T	S	Y	S	T	N	N	L	P	M	I	P	F	Y	I	Y	Y	S	M	F	.	.	.	.	.	G	F	Q	R	I	G	D	L	C	W	A	A	G	D	Q	Q	.	.	.	A	R	G	F	L	I	G	G	T	S	G	R	T	T	L	N	G	E	G	L	Q	H	E	D	.	.
Template Known Secondary structure												T					T	S											G	G	G	.	.	.	.	.	S														T	T	.	.	.			S						S		S	T	T	T	S	T	T	T		T	T	T			.	.
Template Predicted Secondary structure																																.	.	.	.	.																	.	.	.																									.	.
Template SS confidence
		573	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.						.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.				.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.
		734	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	R	Y	L	Q	L	C	A	E	Q	N	M	Q	V	C	V	P	S	T	P	A	Q	V	Y	H	M	L	R	R	Q	A	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	H	S	H	I	Q	S	L	T	I	P	N	C	I	S	Y	D	P	A	Y	A	Y	E	V	A	V	I	M	H	D	G	L	E	R
Template Known Secondary structure		S							T	T	S	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		643	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions