Job Description P0AFG3 Confidence 98.21% Date Wed Jan 25 15:20:33 GMT 2012 Rank 54 Aligned Residues 152 % Identity 18% Template d2ez9a3 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase PP module Resolution 1.60

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		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.		.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		P	V	V	I	G	S	V	R	A	R	L	D	R	L	D	E	P	S	S	N	K	V	L	P	I	T	I	H	G	D	A	A	V	T	G	Q	G	V	V	Q	E	T	L	N	M	S	K	A	R	G	Y	E	V	G	G	T	V	R	I	V	I	N	N	Q	.	V	G	F	T	T	S	N	P	L	D	A	R	S	T	P
Query Conservation																																																																		.
Alig confidence															.	.	.	.	.	.	.	.	.												.					.	.														.	.	.									.
Template Conservation															.	.	.	.	.	.	.	.	.												.					.	.														.	.	.
Template Sequence		P	G	A	I	A	A	K	L	N	Y	P	E	R	.	.	.	.	.	.	.	.	.	Q	V	F	N	L	A	G	D	G	G	A	.	S	M	T	M	.	.	Q	D	L	A	T	Q	V	Q	Y	H	L	P	V	.	.	.	I	N	V	V	F	T	N	C	Q	Y	G	W	I	K	D	E	Q	E	D	T	N	Q	N	D
Template Known Secondary structure												T	T	S	.	.	.	.	.	.	.	.	.												.				G	.	.	G	G							T	T				.	.	.								S	B													S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.												.					.	.														.	.	.
Template SS confidence
		427	.	.	430	.	.	.	.	.	.	.	.	.										440	.	.	.	.	.	.	.	.	.	450		.	.	.	.			.	.	.	.	.	460	.	.	.	.	.	.	.				.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.
		407										.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.				.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.																																																				.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.																																																				.	.	.
Query Sequence		Y	.	.	.	.	.	.	.	.	.	C	T	D	I	G	K	M	V	Q	A	P	I	F	H	V	N	A	D	D	P	E	A	V	A	F	V	T	R	L	A	L	D	F	R	N	T	F	K	R	D	V	F	I	D	L	V	C	Y	R	R	H	.	.	.	G	H	N	E	A	D	E	P	S	A	T	Q	P	L	M	Y
Query Conservation			.	.	.	.	.	.	.	.	.																																																				.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.																	.	.													.	.																				.	.	.
Template Conservation																												.	.													.	.
Template Sequence		F	I	G	V	E	F	N	D	I	D	F	S	K	I	A	D	G	V	H	M	Q	A	F	R	V	N	.	.	K	I	E	Q	L	P	D	V	F	E	Q	A	.	.	K	A	I	A	Q	H	E	P	V	L	I	D	A	V	I	T	G	D	R	P	L	P	A	E	K	L	R	L	D	S	A	M	S	S	A	A	D	I
Template Known Secondary structure				S	S	B													T	T								.	.	B	G	G	G									.	.				T	T	T	S																T	T	S					T	T	T	S
Template Predicted Secondary structure																												.	.													.	.
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.			.	.	520	.	.	.	.	.	.	.	.	.			530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.			.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		Q	K	I	K	K	H	P	T	P	R	K	I	Y	.	.	A	D	K	L	E	Q	E	K	V	A	T
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		E	A	F	K	Q	R	Y	E	A	Q	D	L	Q	P	L	S	T	Y	L	K	Q	F	G	L	D	D
Template Known Secondary structure									T		T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions