Job Description P0AFG3 Confidence 99.20% Date Wed Jan 25 15:20:33 GMT 2012 Rank 41 Aligned Residues 154 % Identity 19% Template d2djia3 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase PP module Resolution 1.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.		.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		P	V	V	I	G	S	V	R	A	R	L	D	R	L	D	E	P	S	S	N	K	V	L	P	I	T	I	H	G	D	A	A	V	T	G	Q	G	V	V	Q	E	T	L	N	M	S	K	A	R	G	Y	E	V	G	G	T	V	R	I	V	I	N	N	Q	.	V	G	F	T	T	S	N	P	L	D	A	R	S	T	P
Query Conservation																																																																		.
Alig confidence															.	.	.	.	.	.	.	.	.												.	.	.																		.	.	.									.
Template Conservation															.	.	.	.	.	.	.	.	.												.	.	.																		.	.	.
Template Sequence		P	G	G	L	G	A	K	N	T	Y	P	D	R	.	.	.	.	.	.	.	.	.	Q	V	W	N	I	I	G	D	G	A	F	.	.	.	S	M	T	Y	P	D	V	V	T	N	V	R	Y	N	M	P	V	.	.	.	I	N	V	V	F	S	N	T	E	Y	A	F	I	K	N	K	Y	E	D	T	N	K	N	L
Template Known Secondary structure												T	T	S	.	.	.	.	.	.	.	.	.												.	.	.				G	G	G							T	T				.	.	.								S	B		T											S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.												.	.	.																		.	.	.
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.										.	.	.	.	.	440	.	.	.	.	.				.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.				.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
		407	.	.	410	.									.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.				.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.																																																.	.	.
Query SS confidence							.	.	.	.	.	.	.	.																																																.	.	.
Query Sequence		Y	C	T	D	I	.	.	.	.	.	.	.	.	G	K	M	V	Q	A	P	I	F	H	V	N	A	D	D	P	E	A	V	A	F	V	T	R	L	A	L	D	F	R	N	T	F	K	R	D	V	F	I	D	L	V	C	Y	R	R	H	.	.	.	G	H	N	E	A	D	E	P	S	A	T	Q	P	L	M	Y	Q
Query Conservation							.	.	.	.	.	.	.	.																																																.	.	.
Alig confidence							.	.	.	.	.	.	.	.													.	.															.																			.	.	.
Template Conservation																											.	.															.
Template Sequence		F	G	V	D	F	T	D	V	D	Y	A	K	I	A	E	A	Q	G	A	K	G	F	T	V	S	.	.	R	I	E	D	M	D	R	V	M	A	E	A	V	A	.	A	N	K	A	G	H	T	V	V	I	D	C	K	I	T	Q	D	R	P	I	P	V	E	T	L	K	L	D	S	K	L	Y	S	E	D	E	I	K
Template Known Secondary structure			S		B													T	T	S							.	.	B														.				T	T											S						T	T	S		T	T		T	T	T	S
Template Predicted Secondary structure																											.	.															.
Template SS confidence
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.			.	.	.	.	.	.	.	.	520	.	.	.	.	.		.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.
		476	.	.	.	480	.	.	.	.	.	.			.	.	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		K	I	K	K	H	P	T	P	R	K	I	.	.	Y	A	D	K	L	E	Q	E	K	V	A	T	L
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		A	Y	K	E	R	Y	E	A	A	N	L	V	P	F	R	E	Y	L	E	A	E	G	L	E	S	K
Template Known Secondary structure							T	T		T	T											T	T				S
Template Predicted Secondary structure
Template SS confidence
		564	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions