Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFG3
Confidence99.96%DateWed Jan 25 15:20:33 GMT 2012
Rank30Aligned Residues186
% Identity22%Templated1w85b1
SCOP infoThiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module
Resolution2.0

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   590.........600.........610.........620.........630.........640.........650.........660.........
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Query Sequence  LFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEY
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Template Sequence  QMTMVQAITDALRIELKNDPNVLIFGEDVG. . . . . . . . . . . . . . VNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAI
Template Known Secondary structure 

TTTT
S..............TT

TTSTTTT
TTT

S
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   2.......10.........20.........30. ........40.........50.........60.......
 
   670.........680.........690.........700..... ....710.........720.........730.........740.......
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Query Sequence  GYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGE. . QKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQLCAEQNMQ
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Template Sequence  GLALQGFRPVP. . EIQFFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLV. . AQQPGLK
Template Known Secondary structure  TT
..B
SSGGGGGGTTTGGGTTTSS




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..TTSTT
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   68.70........ .80.........90.........100.........110.........120.........130...... ...140...
 
   748.750.........760.........770.........780.........790.....
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Query Sequence  VCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELA
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Template Sequence  VVIPSTPYDAKGLLISAIRDN. . DPVIFLEHLKLYRSFRQEVPEGEYT
Template Known Secondary structure 

SSSS..S
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   144.....150.........160.... .....170.........180.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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