Job Description P0AFG3 Confidence 100.00% Date Wed Jan 25 15:20:33 GMT 2012 Rank 7 Aligned Residues 311 % Identity 15% Template d1w85a_ SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase PP module Resolution 2.0

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		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																								.	.	.
Query SS confidence																																								.	.	.
Query Sequence		E	S	G	R	A	T	F	N	S	E	E	K	K	R	F	L	S	E	L	T	A	A	E	G	L	E	R	Y	L	G	A	K	F	P	G	A	K	R	.	.	.	F	S	L	E	G	G	D	A	L	I	P	M	L	K	E	M	I	R	H	A	G	N	S	G	T	R	E	V	V	L	G	M	A	H	R	G	R	L	N
Query Conservation																																								.	.	.
Alig confidence																																								.	.	.														.	.	.	.	.	.													.
Template Conservation																																																								.	.	.	.	.	.													.
Template Sequence		E	E	A	M	P	E	L	S	D	E	Q	L	K	E	L	M	R	R	M	V	Y	T	R	I	L	D	Q	R	S	I	S	L	N	R	Q	G	R	L	G	F	Y	A	P	T	A	G	Q	E	A	S	Q	I	A	S	.	.	.	.	.	.	H	F	A	L	E	K	E	D	F	I	L	P	.	G	Y	R	D	V	P	Q
Template Known Secondary structure		G	G	G																																T	T	S			S					T	T									.	.	.	.	.	.			T			T	T						.		S	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.													.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.							.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	V	N	V	L	G	K	K	P	Q	D	L	F	D	E	F	A	G	K	H	K	E	H	L	G	T	G	D	V	K	Y	H	M	G	F	S	S	D	F	Q	T	D	G	G	L	V	H	L	A	L	A	F	N	P	S	H	L	E	I	V	S	P	V	V	I	G	S	V	R	A	R	L	D	R	L	D	E	P	S
Query Conservation
Alig confidence						.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Conservation						.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template Sequence		I	I	W	H	.	.	G	L	P	L	Y	Q	A	F	L	F	S	R	G	H	F	H	G	N	Q	I	P	E	G	V	N	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	Q	I	I	I	G	A	Q	Y	I	Q	A	A	G	V	A	L	G	L	K	M	R	G	K	K	A	.
Template Known Secondary structure					T	.	.	T												T		G	G	G	G				T	T			B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	T	T																T	T		S		.
Template Predicted Secondary structure						.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Template SS confidence
		108	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																				.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	N	K	V	L	P	I	T	I	H	G	D	A	A	V	T	G	Q	G	V	V	Q	E	T	L	N	M	S	K	A	R	G	Y	E	V	G	G	T	V	R	I	V	I	N	N	Q	V	G	F	T	T	S	N	P	L	D	A	R	S	T	P	Y	C	T	D	I	G	K	M	V	Q	A	P	I	F	H	V	N	A	D
Query Conservation
Alig confidence		.	.	.	.													.																			.	.	.															.
Template Conservation		.	.	.	.													.																			.	.	.															.
Template Sequence		.	.	.	.	V	A	I	T	Y	T	G	D	G	G	T	S	.	Q	G	D	F	Y	E	G	I	N	F	A	G	A	F	K	A	P	A	.	.	.	I	F	V	V	Q	N	N	R	F	A	I	S	T	P	.	V	E	K	Q	T	V	A	K	T	L	A	Q	K	A	V	A	A	G	I	P	G	I	Q	V	D	G	M
Template Known Secondary structure		.	.	.	.								T	G	G	G	G	.	S													T	T				.	.	.								S			T	T			.	G	G	G	T		S		S		S	G	G	G	G	G	G	T	T								T	T
Template Predicted Secondary structure		.	.	.	.													.																			.	.	.															.
Template SS confidence
						166	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.				.	.	.	.	200	.	.	.	.	.	.	.	.	.		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	E	A	V	A	F	V	T	R	L	A	L	D	F	R	N	T	F	K	R	D	V	F	I	D	L	V	C	Y	R	R	H	G	H	N	E	A	D	E	P	S	A	T	Q	P	L	M	Y	Q	K	I	K	K	H	P	T	P	R	K	I	Y	A	D	K	L	E	Q	E	K	V	A	T	L	E	D	A	T	E	M
Query Conservation
Alig confidence																																									.	.	.	.																.
Template Conservation																																									.	.	.	.																.
Template Sequence		D	P	L	A	V	Y	A	A	V	K	A	A	R	E	R	A	I	N	G	E	G	P	T	L	I	E	T	L	C	F	R	Y	G	P	H	T	M	S	G	.	.	.	.	D	S	K	E	L	E	N	E	W	A	K	K	D	P	L	.	V	R	F	R	K	F	L	E	A	K	G	L	W	S	E	E	E	E	N	N	V
Template Known Secondary structure																			T	T	S												S	S		S		S	S		.	.	.	.											T	T				.										T	T
Template Predicted Secondary structure																																									.	.	.	.																.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.					.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	L	Y	R	D	A	L	D	A	G	D	C	V	V	A	E	W	R	P	M	N	M	H	S	F	T	W	S	P	Y	L	N	H	E	W	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	Q	A	K	E	E	I	K	E	A	I	K	K	A	D	E	T	P	K	Q	K	V	T	D	L	I	S	I	M	F	E	E	L	P	F	N
Template Known Secondary structure																		T	S											T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions