Job Description P0AFG3 Confidence 98.71% Date Wed Jan 25 15:20:33 GMT 2012 Rank 47 Aligned Residues 128 % Identity 10% Template d1umdb2 SCOP info TK C-terminal domain-like TK C-terminal domain-like Branched-chain alpha-keto acid dehydrogenase beta-subunit, C-terminal-domain Resolution 1.90

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		798	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.		.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		T	F	L	P	A	I	G	E	I	D	E	L	D	P	K	G	V	K	R	V	V	M	C	S	G	K	V	Y	Y	D	L	L	E	Q	R	R	.	K	N	N	Q	H	D	V	A	I	V	R	I	E	Q	L	Y	P	F	P	H	K	A	M	Q	E	V	L	Q	Q	F	A	H	V	K	D	F	V	W	C	Q	E	E	P
Query Conservation																																						.
Alig confidence																																						.																														.	.	.
Template Conservation																																																																				.	.	.
Template Sequence		D	Y	T	L	P	I	G	K	A	A	L	R	R	E	G	K	D	L	T	L	I	C	Y	G	T	V	M	P	E	V	L	Q	A	A	A	E	L	A	K	A	G	V	S	A	E	V	L	D	L	R	T	L	M	P	W	D	Y	E	A	V	M	N	S	V	A	K	.	.	.	T	G	R	V	V	L	V	S	D	A	P
Template Known Secondary structure							T	T									S	S							G	G	G														T	T												T	T													.	.	.		S
Template Predicted Secondary structure																																																																				.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.
		877	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.			.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		L	N	Q	G	A	W	Y	C	S	Q	H	H	F	R	E	V	I	.	.	P	F	G	A	S	L	R	Y	A	G	R	P	A	S	A	S	P	A	V	G	Y	M	S	V	H	Q	K	Q	Q	Q	D	L	V	N	D	A
Query Conservation																			.	.
Alig confidence																			.	.																				.
Template Conservation																																								.
Template Sequence		R	H	A	S	F	V	S	E	V	A	A	T	I	A	E	D	L	L	D	M	L	L	A	P	P	I	R	V	T	G	F	D	T	P	Y	P	Y	A	.	Q	D	K	L	Y	L	P	T	V	T	R	I	L	N	A	A
Template Known Secondary structure		S	T	T															G	G	G		S	S									S	S				S	T	.	T					S
Template Predicted Secondary structure																																								.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions