Job Description P0AFG3 Confidence 99.02% Date Wed Jan 25 15:20:33 GMT 2012 Rank 43 Aligned Residues 171 % Identity 14% Template d1itza2 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like Pyr module Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	E	K	L	F	D	W	G	G	A	E	N	L	A	Y	A	T	L	V	D	E	G	I	P	V	R	L	S	G	E	D	S	G	R	G	T	F	F	H	R	H	A	V	I	H	N	Q	S	N	G	S	T	Y	T	P	L	Q	H	I	H	N	G	Q	G	A	F	R	V	W	D	S	V	L	S	E	E	A	V	L
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	S	P	G	D	A	T	R	N	L	S	Q	Q	C	L	N	A	L	A	N	V	V	P	G	L	I	G	G	S	A	D	L	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	M	T	L	L	K	M	F	G	D	F	Q	K	D	T	A	E	E	R	N	V	R	F	G	V	R	E	H	G	M	G
Template Known Secondary structure		T	T	S			B																		T	T						S	S				.	.	.	.	.	.	.	.	.	.	.	.	.			T				T	T			B			T	T		T	T			B					S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.														.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
		666	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.			.	730	.	.	.	.	.	.	.	.	.	740	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		A	F	E	Y	G	Y	A	T	A	E	P	R	T	L	T	I	W	E	A	Q	F	G	D	F	A	N	G	A	Q	V	V	I	D	Q	F	I	S	S	G	E	Q	K	W	G	R	M	C	G	L	V	M	L	L	P	H	G	Y	E	G	Q	G	P	E	.	.	H	S	S	A	R	L	E	R	Y	L	Q	L	C	A	E
Query Conservation																																																																	.	.
Alig confidence																					.													.	.	.	.	.	.	.																									.	.					.
Template Conservation																					.													.	.	.	.	.	.	.																															.
Template Sequence		A	I	C	N	G	I	A	L	H	S	P	G	F	V	P	Y	C	A	T	.	F	F	V	F	T	D	Y	M	R	G	A	M	.	.	.	.	.	.	.	R	I	S	A	L	S	E	A	G	V	I	Y	V	M	T	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	P	.	I	E	H	L	V	S	F	R	A	M
Template Known Secondary structure									T	T		T	T								.		G	G	G									.	.	.	.	.	.	.							T											S	G	G	G		T	T		T	T	T			.	S	S							S	S
Template Predicted Secondary structure																					.													.	.	.	.	.	.	.																															.
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.		.	.	.	450	.	.	.	.	.	.	.	.								.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.		.	490	.	.	.	.	.	.	.	.
		744	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.		.	.	.	.	.	.	.	.	780
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		Q	N	M	Q	V	C	V	P	S	T	P	A	Q	V	Y	H	M	L	R	R	Q	A	L	R	G	M	R	R	.	P	L	V	V	M	S	P	K	S
Query Conservation																														.
Alig confidence																											.	.		.
Template Conservation																											.	.
Template Sequence		P	N	I	L	M	L	R	P	A	D	G	N	E	T	A	G	A	Y	K	V	A	V	L	N	R	.	.	K	R	P	S	I	L	A	L	S	R	Q
Template Known Secondary structure		S	S								S															T	.	.	T	S								S	S
Template Predicted Secondary structure																											.	.
Template SS confidence
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.			.	.	.	.	.	.	530	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions