Job Description P0AFG3 Confidence 98.91% Date Wed Jan 25 15:20:33 GMT 2012 Rank 44 Aligned Residues 174 % Identity 13% Template d1gpua2 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like Pyr module Resolution 1.86

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		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	E	K	L	F	D	W	G	G	A	E	N	L	A	Y	A	T	L	V	D	E	G	I	P	V	R	L	S	G	E	D	S	G	R	G	T	F	F	H	R	H	A	V	I	H	N	Q	S	N	G	S	T	Y	T	P	L	Q	H	I	H	N	G	Q	G	A	F	R	V	W	D	S	V	L	S	E	E	A	V	L
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.																		.
Template Conservation																																										.	.	.	.	.	.	.																		.
Template Sequence		A	K	D	S	A	V	A	T	R	K	L	S	E	T	V	L	E	D	V	Y	N	Q	L	P	E	L	I	G	G	S	A	D	L	T	P	S	N	L	T	R	.	.	.	.	.	.	.	W	K	E	A	L	D	F	Q	P	P	S	S	G	S	G	N	Y	.	S	G	R	Y	I	R	Y	G	I	R	E	H	A	M	G
Template Known Secondary structure		T	T	S			B														T	T	T		T	T						S	S						T		S	.	.	.	.	.	.	.		T	T							T	T	T	S	S			T	.	T								S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.																		.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390								.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
		666	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.				.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.
Predicted Secondary structure																																																										.	.	.
Query SS confidence																																																										.	.	.
Query Sequence		A	F	E	Y	G	Y	A	T	A	E	P	R	T	L	T	I	W	E	A	Q	F	G	D	F	A	N	G	A	Q	V	V	I	D	Q	F	I	S	S	G	E	Q	K	W	G	R	M	C	G	L	V	M	L	L	P	H	G	.	.	.	Y	E	G	Q	G	P	E	H	S	S	A	R	L	E	R	Y	L	Q	L	C	A
Query Conservation																																																										.	.	.
Alig confidence																			.																		.				.	.	.	.	.	.												.	.	.																		.	.
Template Conservation																			.																		.				.	.	.	.	.	.																																.	.
Template Sequence		A	I	M	N	G	I	S	A	F	G	A	N	Y	K	P	Y	G	.	G	T	F	L	N	F	V	S	Y	A	A	G	A	V	R	L	S	.	A	L	S	.	.	.	.	.	.	G	H	P	V	I	W	V	A	T	H	D	S	I	G	V	G	E	D	G	P	T	H	Q	P	I	E	T	L	A	H	F	.	.	R	S
Template Known Secondary structure												T	T						.								G	G	G								.				.	.	.	.	.	.	T											S	G	G	G		T	T		T	T	T			S	S						.	.		T
Template Predicted Secondary structure																			.																		.				.	.	.	.	.	.																																.	.
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.		.	.	.							460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490			.	.
		743	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.		.	.	770	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		E	Q	N	M	Q	V	C	V	P	S	T	P	A	Q	V	Y	H	M	L	R	R	Q	A	L	R	.	G	M	R	R	P	L	V	V	M	S	P	K
Query Conservation																											.
Alig confidence																											.		.	.
Template Conservation																													.	.
Template Sequence		L	P	N	I	Q	V	W	R	P	A	D	G	N	E	V	S	A	A	Y	K	N	S	L	E	S	K	H	.	.	T	P	S	I	I	A	L	S	R
Template Known Secondary structure		S	S	S								S															S	S	.	.									S
Template Predicted Secondary structure																													.	.
Template SS confidence
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.			520	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions