Job Description P0AFG3 Confidence 99.82% Date Wed Jan 25 15:20:33 GMT 2012 Rank 34 Aligned Residues 191 % Identity 14% Template d1gpua1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like PP module Resolution 1.86

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		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.								.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.																																						.
Query SS confidence																											.	.	.	.	.	.	.																																						.
Query Sequence		F	N	P	S	H	L	E	I	V	S	P	V	V	I	G	S	V	R	A	R	L	D	R	L	D	.	.	.	.	.	.	.	E	P	S	S	N	K	V	L	P	I	T	I	H	G	D	A	A	V	T	G	Q	G	V	V	Q	E	T	L	N	M	S	K	A	R	G	Y	E	.	V	G	G	T	V	R	I	V	I	N
Query Conservation																											.	.	.	.	.	.	.																																						.
Alig confidence																											.	.	.	.	.	.	.												.	.							.																		.		.	.	.
Template Conservation																																													.	.							.																				.	.	.
Template Sequence		V	T	T	G	P	L	G	Q	G	I	S	N	A	V	G	M	A	M	A	Q	A	N	L	A	A	T	Y	N	K	P	G	F	T	L	S	D	N	Y	T	Y	V	F	L	.	.	G	D	G	C	L	Q	.	E	G	I	S	S	E	A	S	S	L	A	G	H	L	K	L	G	N	L	.	.	.	I	A	I	Y	D	D
Template Known Secondary structure		S				S	T	T																						B	T	T	B												.	.							.	S													T	T		T	T		.	.	.
Template Predicted Secondary structure																																													.	.							.																				.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.			.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence		N	Q	V	G	F	T	T	S	N	P	L	D	A	R	S	T	P	Y	C	T	D	I	G	K	M	V	Q	A	P	I	F	H	V	N	.	.	A	D	D	P	E	A	V	A	F	V	T	R	L	A	L	D	F	R	N	T	F	K	R	D	V	F	I	D	L	V	C	Y	R	R	H	G	H	N	E	A	D	E	P	S
Query Conservation																																				.	.
Alig confidence									.	.																										.	.															.	.	.
Template Conservation									.	.																																										.	.	.
Template Sequence		N	K	I	T	I	D	G	.	.	A	T	S	I	S	F	D	E	D	V	A	K	R	Y	E	A	Y	G	W	E	V	L	Y	V	E	N	G	N	E	D	L	A	G	I	A	K	A	I	A	Q	A	.	.	.	K	L	S	K	D	K	P	T	L	I	K	M	T	T	T	I	G	Y	G	S	L	H	A	G	S	H	S
Template Known Secondary structure			S			T	T		.	.		G	G	G	T													T							S		T	T	T													.	.	.				T	T	S										T	T	T	T	S	T	T	T	T	S	G	G
Template Predicted Secondary structure									.	.																																										.	.	.
Template SS confidence
		187	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
						468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.													.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	A	T	Q	P	L	M	Y	Q	K	I	K	K	H	P	T	P	.	.	.	.	.	.	.	.	.	.	.	.	R	K	I	Y	A	D	K	L	E	Q	E	K	V	A	T	L	E	D	A	T	E	M	V	N	L	Y	R	D	A	L	D	A	G	D	C	V
Query Conservation		.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	H	G	A	P	L	K	A	D	D	V	K	Q	L	K	S	K	F	G	F	N	P	D	K	S	F	V	V	P	Q	E	V	Y	D	H	Y	Q	K	T	I	L	K	P	G	V	E	A	N	N	K	W	N	K	L	F	S	E	Y	Q	K	K	F	P	E	L	G	A	E
Template Known Secondary structure		G	S	S	S														T	T			T	T			S														T
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions