Job Description P0AFG3 Confidence 100.00% Date Wed Jan 25 15:20:33 GMT 2012 Rank 23 Aligned Residues 464 % Identity 12% Template c3uk1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:transketolase; PDBTitle: crystal structure of a transketolase from burkholderia thailandensis2 with an oxidized cysteinesulfonic acid in the active site Resolution 2.15 Å

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		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.								.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.																																						.
Query SS confidence																											.	.	.	.	.	.	.																																						.
Query Sequence		F	N	P	S	H	L	E	I	V	S	P	V	V	I	G	S	V	R	A	R	L	D	R	L	D	.	.	.	.	.	.	.	E	P	S	S	N	K	V	L	P	I	T	I	H	G	D	A	A	V	T	G	Q	G	V	V	Q	E	T	L	N	M	S	K	A	R	G	Y	E	.	V	G	G	T	V	R	I	V	I	N
Query Conservation																											.	.	.	.	.	.	.																																						.
Alig confidence																											.	.	.	.	.	.	.												.	.				.			.																		.		.	.	.
Template Conservation																																													.	.				.			.																				.	.	.
Template Sequence		T	T	T	G	P	L	G	Q	G	L	A	N	A	V	G	M	A	L	G	E	A	L	L	A	A	E	F	N	R	D	D	A	K	I	V	D	H	H	T	Y	V	F	L	.	.	G	D	G	.	L	M	.	E	G	I	S	H	E	A	C	S	L	A	G	T	L	K	L	N	K	L	.	.	.	I	A	L	Y	D	D
Template Known Secondary structure		S				S	T	T																						B	T	T	B												.	.				.			.	S													T	T		T	T		.	.	.
Template Predicted Secondary structure																																													.	.				.			.																				.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.		.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.							.	.	.	460	.	.
Predicted Secondary structure																																			.																																			.	.	.	.	.	.
Query SS confidence																																			.																																			.	.	.	.	.	.
Query Sequence		N	Q	V	G	F	T	T	S	N	P	L	D	A	R	S	T	P	Y	C	T	D	I	G	K	M	V	Q	A	P	I	F	H	V	.	N	A	D	D	P	E	A	V	A	F	V	T	R	L	A	L	D	F	R	N	T	F	K	R	D	V	F	I	D	L	V	C	Y	R	.	.	.	.	.	.	R	H	G	H	N	E
Query Conservation																																			.																																			.	.	.	.	.	.
Alig confidence									.	.																									.																.	.	.	.																.	.	.	.	.	.
Template Conservation									.	.																																									.	.	.	.
Template Sequence		N	G	I	S	I	D	G	.	.	D	V	V	N	W	F	H	D	D	T	P	K	R	F	E	A	Y	G	W	N	V	I	P	N	V	N	G	H	D	V	D	A	I	D	A	A	I	A	K	A	.	.	.	.	K	R	S	D	K	P	S	L	I	C	C	K	T	G	A	D	E	I	A	K	T	R	E	A	L	G	W
Template Known Secondary structure			S			T	T		.	.		G	G	G	T												T	T									T	T													.	.	.	.	T	T		S	S																					T
Template Predicted Secondary structure									.	.																																									.	.	.	.
Template SS confidence
		205	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.					.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	E	P	S	A	T	Q	P	L	M	Y	Q	K	I	K	K	H	P	T	P	R	K	I	Y	A	D	K	L	E	Q	E	K	V	A	T	L	E	D	A	T	E	M	V	N	L	Y	R	D	A	L	D	A	G	D	C	V	V	A	E	W	R	P	M	N	M	H	S	F	T	W	S	P	Y	L	N	H	E	W	D
Query Conservation
Alig confidence																														.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Sequence		T	W	A	P	F	V	I	P	Q	E	V	Y	A	A	W	D	A	K	E	A	G	K	R	S	E	D	D	W	.	.	.	.	.	.	.	.	N	A	A	F	A	Q	Y	R	A	K	Y	P	A	E	A	A	E	F	E	R	R	M	A	G	T	L	P	A	D	W	A	A	K	A	A	A	I	V	.	.	.	.	.	.
Template Known Secondary structure					T	T																								.	.	.	.	.	.	.	.																								T				T	T										.	.	.	.	.	.
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.									.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	Y	P	N	K	V	E	M	K	R	L	Q	E	L	A	K	R	I	S	T	V	P	E	A	V	E	M	Q	S	R	V	A	K	I	Y	G	D	R	Q	A	M	A	A	G	E	K	L	F	D	W	G	G	A	E	N	L	A	Y	A	T	L	V	D	E	G	I	P	V	R	L	S	G	E	D	S	G	R	G	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	A	N	E	R	G	E	T	V	A	T	R	K	A	S	Q	Q	T	I	E	G	L	A	A	V	L	P	E	L	L	G	G	S	A	D	L	T	G	S	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												T	T						S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																									365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		623	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.		.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		F	F	H	R	H	A	V	I	H	N	Q	S	N	G	S	T	Y	T	P	L	Q	H	I	H	N	G	Q	G	A	F	R	V	W	D	S	V	L	S	E	E	A	V	L	A	F	E	Y	G	Y	A	T	A	E	.	P	R	T	L	T	I	W	E	A	Q	F	G	D	F	A	N	G	A	Q	V	V	I	D	Q	F	I
Query Conservation																																																							.
Alig confidence					.	.	.	.	.	.	.	.																																											.						.	.	.								.	.	.
Template Conservation					.	.	.	.	.	.	.	.																																																	.	.	.								.	.	.
Template Sequence		L	T	N	.	.	.	.	.	.	.	.	W	K	A	S	K	A	V	R	A	N	A	D	G	P	G	V	Q	W	G	N	H	I	N	Y	G	V	R	E	F	G	M	S	A	A	I	N	G	L	V	L	H	G	G	Y	K	P	F	G	.	.	.	G	T	F	L	T	F	S	.	.	.	D	Y	S	R	N	A	L	R
Template Known Secondary structure		T			.	.	.	.	.	.	.	.		T	T			B					S	S	S	S	S					S						S																S	S						.	.	.				G	G	G		.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.	.																																																	.	.	.								.	.	.
Template SS confidence
		406	.	.									.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.				.	.	.	460	.	.	.				.	.	.	.	.	.	470	.
		702	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.				.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		S	S	G	E	Q	K	W	G	R	M	C	G	L	V	M	L	L	P	H	G	Y	.	.	.	E	G	Q	G	P	E	H	S	S	A	R	L	E	R	Y	L	Q	L	C	A	E	Q	N	M	Q	V	C	V	P	S	T	P	A	Q	V	Y	H	M	L	R	R	Q	A	L	R	G	M	R	R	P	L	V	V	M	S	P
Query Conservation																							.	.	.
Alig confidence								.	.	.	.												.	.	.																	.	.																													.	.
Template Conservation								.	.	.	.																															.	.																													.	.
Template Sequence		V	A	A	L	M	K	.	.	.	.	V	P	S	I	F	V	F	T	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	S	V	E	H	V	A	S	L	.	.	R	L	I	P	N	L	D	V	W	R	P	A	D	T	V	E	T	A	V	A	W	T	Y	A	V	A	H	Q	.	.	H	P	S	C	L	I	F	S
Template Known Secondary structure							T	.	.	.	.											S	G	G	G		T	T		T	T	T			S	S						.	.		T	S	T	T							S	S														S	S	.	.	S
Template Predicted Secondary structure								.	.	.	.																															.	.																													.	.
Template SS confidence
		472	.	.	.	.	.					.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.			.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.			.	.	.	.	540	.	.	.
		779	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.		.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		K	S	L	L	R	H	P	L	A	V	S	S	L	E	E	L	A	N	G	T	F	L	P	A	I	G	E	I	D	E	L	D	P	K	G	V	K	R	V	V	M	C	S	G	K	V	Y	Y	D	L	L	E	Q	R	R	.	K	N	N	Q	H	D	V	A	I	V	R	I	E	Q	L	Y	P	F	P	H	K	A	M	Q
Query Conservation																																																									.
Alig confidence																						.																																			.
Template Conservation																						.
Template Sequence		R	Q	N	L	A	F	N	A	R	T	D	A	Q	L	A	N	V	E	K	G	.	G	Y	V	L	R	D	W	D	E	E	I	V	A	R	K	I	I	L	I	A	T	G	S	E	V	E	L	A	M	K	A	V	E	P	L	A	Q	Q	G	I	A	A	R	V	V	S	M	P	S	S	D	V	F	D	R	Q	D	A	E
Template Known Secondary structure		S	S															G	G	G	S	.	S								S	S			S									T	T															T	T									S							T	S
Template Predicted Secondary structure																						.
Template SS confidence
		544	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.		.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.
		858	.	860	.	.	.	.	.	.	.	.	.	870
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	L	Q	Q	F	A	H	V	K	D	F	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	R	E	R	V	L	P	H	G	V	R	R	V
Template Known Secondary structure							S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		623	.	.	.	.	.	.	630	.	.	.	.	.