Job Description P0AFG3 Confidence 23.91% Date Wed Jan 25 15:20:33 GMT 2012 Rank 139 Aligned Residues 69 % Identity 22% Template c3amlA_ PDB info PDB header:transferase Chain: A: PDB Molecule:os06g0726400 protein; PDBTitle: structure of the starch branching enzyme i (bei) from oryza sativa l Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		675	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.										.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.										720	.	.	.	.	.	.				.	.	.	730	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.								.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.								.	.	.
Query Sequence		E	P	R	T	L	T	I	W	E	A	Q	F	G	D	F	A	N	G	.	.	.	.	.	.	.	.	.	A	Q	V	V	I	D	Q	F	I	S	S	G	E	Q	K	W	G	R	M	C	G	L	V	M	L	L	P	.	.	.	.	.	.	.	.	.	H	G	Y	E	G	Q	G	.	.	.	P	E	H	S	S	A	R
Query Conservation																				.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.								.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation																																									.	.	.	.	.	.	.
Template Sequence		K	P	D	A	P	R	I	Y	E	A	H	V	G	M	S	G	E	E	P	E	V	S	T	Y	R	E	F	A	D	N	V	L	P	R	I	R	A	N	N	.	.	.	.	.	.	.	Y	N	T	V	Q	L	M	A	I	M	E	H	S	Y	Y	A	S	F	G	Y	H	V	T	N	F	F	A	V	S	S	R	S	G	T
Template Known Secondary structure				S	S								S	T	T		S	S	S	S	S											T							T	T	.	.	.	.	.	.	.								S					S		G	G	G	T	T		S		S							G	G	G
Template Predicted Secondary structure																																									.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.								.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		734	.	.	.	.	.	740				.	.	.	.	.	.	.	.	.	750
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		L	E	R	Y	L	Q	L	.	.	.	C	A	E	Q	N	M	Q	V	C	V
Query Conservation									.	.	.
Alig confidence									.	.	.
Template Conservation
Template Sequence		P	E	D	L	K	Y	L	V	D	K	A	H	S	L	G	L	R	V	L	M
Template Known Secondary structure															T	T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions