Job Description P0AFG3 Confidence 96.11% Date Wed Jan 25 15:20:33 GMT 2012 Rank 86 Aligned Residues 113 % Identity 17% Template c2w93A_ PDB info PDB header:lyase Chain: A: PDB Molecule:pyruvate decarboxylase isozyme 1; PDBTitle: crystal structure of the saccharomyces cerevisiae pyruvate2 decarboxylase variant e477q in complex with the surrogate3 pyruvamide Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.							.	.	.	.	.	.	400	.
Predicted Secondary structure																																																																				.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.
Query Sequence		P	V	V	I	G	S	V	R	A	R	L	D	R	L	D	E	P	S	S	N	K	V	L	P	I	T	I	H	G	D	A	A	V	T	G	Q	G	V	V	Q	E	T	L	N	M	S	K	A	R	G	Y	E	V	G	G	T	V	R	I	V	I	N	N	Q	V	G	.	.	.	.	.	.	F	T	T	S	N	P	L	D
Query Conservation																																																																				.	.	.	.	.	.
Alig confidence																			.	.	.	.	.												.	.														.					.	.	.											.	.	.	.	.	.
Template Conservation																			.	.	.	.	.												.	.														.					.	.	.
Template Sequence		G	A	T	L	G	A	A	F	A	A	E	E	I	D	P	K	K	.	.	.	.	.	R	V	I	L	F	I	G	D	G	S	L	.	.	Q	L	T	V	Q	E	I	S	T	M	I	R	W	.	G	L	K	P	.	.	.	Y	L	F	V	L	N	N	D	G	Y	T	I	Q	K	L	I	H	G	P	K	A	Q	Y	N
Template Known Secondary structure																T	T		.	.	.	.	.												.	.				T	T								T	.	T				.	.	.							S	S	S						T	T	S		T	T		G	G	G
Template Predicted Secondary structure																			.	.	.	.	.												.	.														.					.	.	.
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.						.	.	.	440	.	.	.	.	.	.	.			.	.	450	.	.	.	.	.	.	.	.	.	460		.	.	.	.				.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420		.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		A	R	S	T	P	Y	C	T	D	I	G	K	M	V	Q	A	P	I	F	.	H	V	N	A	D	D	P	E	A	V	A	F	V	T	R	L	A	L	D	F	R	N	T	F	K	R	D	V	F	I	D	L	V
Query Conservation																					.
Alig confidence																					.																					.	.
Template Conservation																																										.	.
Template Sequence		E	I	Q	G	W	D	H	L	S	L	L	P	T	F	G	A	K	D	Y	E	T	H	R	V	A	T	T	G	E	W	D	K	L	T	Q	D	K	S	F	N	.	.	D	N	S	K	I	R	M	I	E	V	M
Template Known Secondary structure								G	G	G					T	T		S	S								B									T		T	T	T	T	.	.	S			S
Template Predicted Secondary structure																																										.	.
Template SS confidence
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.			.	530	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions