Job Description P0AFG3 Confidence 96.66% Date Wed Jan 25 15:20:33 GMT 2012 Rank 81 Aligned Residues 109 % Identity 18% Template c2vbgB_ PDB info PDB header:lyase Chain: B: PDB Molecule:branched-chain alpha-ketoacid decarboxylase; PDBTitle: the complex structure of the branched-chain keto acid2 decarboxylase (kdca) from lactococcus lactis with 2r-1-3 hydroxyethyl-deazathdp Resolution 1.80 Å

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		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.							.	.	.	.	.	400	.
Predicted Secondary structure																																																																					.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.
Query Sequence		P	V	V	I	G	S	V	R	A	R	L	D	R	L	D	E	P	S	S	N	K	V	L	P	I	T	I	H	G	D	A	A	V	T	G	Q	G	V	V	Q	E	T	L	N	M	S	K	A	R	G	Y	E	V	G	G	T	V	R	I	V	I	N	N	Q	V	G	F	.	.	.	.	.	.	T	T	S	N	P	L	D
Query Conservation																																																																					.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.												.	.	.	.	.																														.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Sequence		P	A	A	L	G	S	Q	I	A	D	K	E	S	.	.	.	.	.	.	.	.	.	R	H	L	L	F	I	G	D	G	S	L	.	.	.	.	.	Q	L	T	V	Q	E	L	G	L	S	I	R	E	K	L	N	P	I	C	F	I	I	N	N	D	G	Y	T	V	E	R	E	I	H	G	P	T	Q	S	Y	N	D
Template Known Secondary structure												T	T	S	.	.	.	.	.	.	.	.	.												.	.	.	.	.				G	G	G							T	T										S	S	S								S		T	T		G	G	G
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.										.	.	.	.	.	.	.	.	430	.	.						.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.				.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		A	R	S	T	P	Y	C	T	D	I	G	K	M	V	Q	A	P	.	.	.	I	F	H	V	N	A	D	D	P	E	A	V	A	F	V	T	R	L	A	L	D	F	R	N	T	F	K	R	D	V	F	I	D	L	V	C
Query Conservation																			.	.	.
Alig confidence									.										.	.	.																					.	.	.
Template Conservation									.																																	.	.	.
Template Sequence		I	P	M	W	N	Y	S	.	K	L	P	E	T	F	G	A	T	E	D	R	V	V	S	K	I	V	R	T	E	N	E	F	V	S	V	M	K	E	A	Q	.	.	.	A	D	V	N	R	M	Y	W	I	E	L	V	L
Template Known Secondary structure							G	G	.	G					T	T			T	T	T								B													.	.	.			T	T	S
Template Predicted Secondary structure									.																																	.	.	.
Template SS confidence
		475	.	.	.	.	480	.		.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.				.	.	.	.	.	.	520	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions