Job Description P0AFG3 Confidence 100.00% Date Wed Jan 25 15:20:33 GMT 2012 Rank 17 Aligned Residues 469 % Identity 12% Template c2r8pA_ PDB info PDB header:transferase Chain: A: PDB Molecule:transketolase 1; PDBTitle: transketolase from e. coli in complex with substrate d-2 fructose-6-phosphate Resolution 1.65 Å

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		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.								.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.																																					.
Query SS confidence																											.	.	.	.	.	.	.																																					.
Query Sequence		F	N	P	S	H	L	E	I	V	S	P	V	V	I	G	S	V	R	A	R	L	D	R	L	D	.	.	.	.	.	.	.	E	P	S	S	N	K	V	L	P	I	T	I	H	G	D	A	A	V	T	G	Q	G	V	V	Q	E	T	L	N	M	S	K	A	R	G	Y	.	E	V	G	G	T	V	R	I	V	I	N
Query Conservation																											.	.	.	.	.	.	.																																					.
Alig confidence																											.	.	.	.	.	.	.												.	.							.																	.			.	.	.
Template Conservation																																													.	.							.																				.	.	.
Template Sequence		T	T	T	G	P	L	G	Q	G	I	A	N	A	V	G	M	A	I	A	E	K	T	L	A	A	Q	F	N	R	P	G	H	D	I	V	D	H	Y	T	Y	A	F	M	.	.	G	D	G	C	M	M	.	E	G	I	S	H	E	V	C	S	L	A	G	T	L	K	L	G	K	L	.	.	.	I	A	F	Y	D	D
Template Known Secondary structure		S				S	T	T																						B	T	T	B												.	.							.	S													T	T		T	T		.	.	.
Template Predicted Secondary structure																																													.	.							.																				.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.		.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure																																		.																																														.	.
Query SS confidence																																		.																																														.	.
Query Sequence		N	Q	V	G	F	T	T	S	N	P	L	D	A	R	S	T	P	Y	C	T	D	I	G	K	M	V	Q	A	P	I	F	H	.	V	N	A	D	D	P	E	A	V	A	F	V	T	R	L	A	L	D	F	R	N	T	F	K	R	D	V	F	I	D	L	V	C	Y	R	R	H	G	H	N	E	A	D	E	P	.	.
Query Conservation																																		.																																														.	.
Alig confidence									.	.																								.																					.	.	.																							.	.
Template Conservation									.	.																																													.	.	.
Template Sequence		N	G	I	S	I	D	G	.	.	H	V	E	G	W	F	T	D	D	T	A	M	R	F	E	A	Y	G	W	H	V	I	R	D	I	D	G	H	D	A	A	S	I	K	R	A	V	E	E	A	R	A	V	T	.	.	.	D	K	P	S	L	L	M	C	K	T	I	I	G	F	G	S	P	N	K	A	G	T	H	D
Template Known Secondary structure			S			T	T		.	.		G	G	G	T												T	T									T	T																	.	.	.	S	S										T	T	T	T		T	T	T	T	T	S	G	G
Template Predicted Secondary structure									.	.																																													.	.	.
Template SS confidence
		185	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
					467	.	.	470	.	.	.	.	.	.	.	.	.	480						.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.															.	.	.	.	.
Query SS confidence		.	.	.															.	.	.	.	.
Query Sequence		.	.	.	S	A	T	Q	P	L	M	Y	Q	K	I	K	K	H	.	.	.	.	.	P	T	P	R	K	I	Y	A	D	K	L	E	Q	E	K	V	A	T	L	E	D	A	T	E	M	V	N	L	Y	R	D	A	L	D	A	G	D	C	V	V	A	E	W	R	P	M	N	M	H	S	F	T	W	S	P	Y	L	N
Query Conservation		.	.	.															.	.	.	.	.
Alig confidence		.	.	.															.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		S	H	G	A	P	L	G	D	A	E	I	A	L	T	R	E	Q	L	G	W	K	Y	A	P	F	E	I	P	S	E	I	Y	A	Q	W	D	A	K	E	A	G	Q	A	K	E	S	A	W	N	E	K	F	A	A	Y	A	K	A	Y	P	Q	E	A	A	E	F	T	R	R	M	K	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G	T	S	S															T					T	T																																															.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	W	D	E	E	Y	P	N	K	V	E	M	K	R	L	Q	E	L	A	K	R	I	S	T	V	P	E	A	V	E	M	Q	S	R	V	A	K	I	Y	G	D	R	Q	A	M	A	A	G	E	K	L	F	D	W	G	G	A	E	N	L	A	Y	A	T	L	V	D	E	G	I	P	V	R	L	S	G	E	D	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	M	P	S	D	F	D	A	K	A	K	E	F	I	A	K	L	Q	A	N	P	A	K	I	A	S	R	K	A	S	Q	N	A	I	E	A	F	G	P	L	L	P	E	F	L	G	G	S	A	D	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				T	T															S																		T	T	T		T	T						S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																														331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
		619	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.		.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		G	R	G	T	F	F	H	R	H	A	V	I	H	N	Q	S	N	G	S	T	Y	T	P	L	Q	H	I	H	N	G	Q	G	A	F	R	V	W	D	S	V	L	S	E	E	A	V	L	A	F	E	Y	G	Y	A	T	A	.	E	P	R	T	L	T	I	W	E	A	Q	F	G	D	F	A	N	G	A	Q	V	V	I
Query Conservation																																																										.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.																	.																									.							.	.			.									.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.																	.																																.	.			.									.	.	.
Template Sequence		A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	L	T	L	W	S	G	S	K	A	I	N	E	D	A	.	A	G	N	Y	I	H	Y	G	V	R	E	F	G	M	T	A	I	A	N	G	I	S	L	H	G	G	F	L	P	Y	T	.	.	S	T	.	F	L	M	F	V	E	Y	A	.	.	.	R
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.			T				T	T			B	T	T	T		T	.	T		S						S																S	S						.	.			.		G	G	G	G	G	T	T	.	.	.
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.																	.																																.	.			.									.	.	.
Template SS confidence
		383	.														.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400		.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.			.	.		.	.	.	.	.	.	440	.				.
		698	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.		.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.		.	.	770	.	.	.	.	.
Predicted Secondary structure																										.																																															.
Query SS confidence																										.																																															.
Query Sequence		D	Q	F	I	S	S	G	E	Q	K	W	G	R	M	C	G	L	V	M	L	L	P	H	G	.	Y	E	G	Q	G	P	E	H	S	S	A	R	L	E	R	Y	L	Q	L	C	A	E	Q	N	M	Q	V	C	V	P	S	T	P	A	Q	V	Y	H	M	L	R	R	Q	A	L	R	.	G	M	R	R	P	L	V	V
Query Conservation																										.																																															.
Alig confidence								.	.																	.																		.	.																												.		.	.
Template Conservation								.	.																																			.	.																														.	.
Template Sequence		N	A	V	R	M	A	.	.	A	L	M	K	Q	R	Q	V	M	V	Y	T	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	P	V	E	Q	V	A	S	L	.	.	R	V	T	P	N	M	S	T	W	R	P	C	D	Q	V	E	S	A	V	A	W	K	Y	G	V	E	R	Q	D	.	.	G	P	T	A	L
Template Known Secondary structure								.	.			T	T											S	G	G	G		T	T		T	T	T			S	S						.	.		T	S	T	T							S	S															S	S	.	.	S
Template Predicted Secondary structure								.	.																																			.	.																														.	.
Template SS confidence
		443	.	.	.	.	.			.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.			.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.			.	.	.	.	.
		776	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.		.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		M	S	P	K	S	L	L	R	H	P	L	A	V	S	S	L	E	E	L	A	N	G	T	F	L	P	A	I	G	E	I	D	E	L	D	P	K	G	V	K	R	V	V	M	C	S	G	K	V	Y	Y	D	L	L	E	Q	R	R	.	K	N	N	Q	H	D	V	A	I	V	R	I	E	Q	L	Y	P	F	P	H	K
Query Conservation																																																												.
Alig confidence																									.							.	.	.																										.
Template Conservation																									.							.	.	.
Template Sequence		I	L	S	R	Q	N	L	A	Q	Q	E	R	T	E	E	Q	L	A	N	I	A	R	G	.	G	Y	V	L	K	D	.	.	.	C	A	G	Q	P	E	L	I	F	I	A	T	G	S	E	V	E	L	A	V	A	A	Y	E	K	L	T	A	E	G	V	K	A	R	V	V	S	M	P	S	T	D	A	F	D	K	Q
Template Known Secondary structure					S	S															G	G	G	S	.							.	.	.		S	S	S		S							G	G	G															T									S							T	S
Template Predicted Secondary structure																									.							.	.	.
Template SS confidence
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.		540	.	.	.	.	.				.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.
		855	.	.	.	.	860	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	Q	E	V	L	Q	Q	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	A	Y	R	E	S	V	L	P
Template Known Secondary structure										S
Template Predicted Secondary structure
Template SS confidence
		593	.	.	.	.	.	.	600	.	.