Job Description P0AFG3 Confidence 98.48% Date Wed Jan 25 15:20:33 GMT 2012 Rank 51 Aligned Residues 204 % Identity 17% Template c2c3yA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:pyruvate-ferredoxin oxidoreductase; PDBTitle: crystal structure of the radical form of2 pyruvate:ferredoxin oxidoreductase from desulfovibrio3 africanus Resolution 1.93 Å

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		660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.						.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.
Query Sequence		S	E	E	A	V	L	A	F	E	Y	G	Y	A	T	A	E	P	R	T	L	T	I	W	E	A	Q	F	G	D	F	A	N	G	A	Q	V	V	I	D	Q	F	I	S	S	G	E	Q	K	W	G	R	M	C	G	L	V	M	.	.	.	.	.	L	L	P	H	G	Y	E	G	Q	G	P	E	H	S	S	A	R	L
Query Conservation																																																											.	.	.	.	.
Alig confidence																												.	.	.	.	.	.														.	.	.	.									.	.	.	.	.
Template Conservation																												.	.	.	.	.	.														.	.	.	.
Template Sequence		S	E	A	G	A	A	G	A	V	H	G	A	L	A	A	G	A	L	T	T	T	F	T	A	S	Q	.	.	.	.	.	.	G	L	L	L	M	I	P	N	M	Y	K	I	S	.	.	.	.	G	E	L	L	P	G	V	F	H	V	T	A	R	A	I	A	A	H	A	L	S	I	F	G	D	H	Q	D	I	Y	A
Template Known Secondary structure		S														T	T											.	.	.	.	.	.														.	.	.	.		T	T										B				S	S	S				S	B		S
Template Predicted Secondary structure																												.	.	.	.	.	.														.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.							.	90	.	.	.	.	.	.	.	.	.	100	.					.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		735	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.			.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.																											.	.
Predicted Secondary structure																																			.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	R	Y	L	Q	L	C	A	E	Q	N	M	Q	V	C	V	P	S	T	P	A	Q	V	Y	H	M	L	R	R	Q	A	L	R	.	.	G	M	R	R	P	L	V	V	M	S	P	K	S	L	L	R	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L
Query Conservation																																			.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.																								.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.
Template Sequence		A	R	Q	T	.	.	.	.	.	.	G	F	A	M	L	A	S	S	S	V	Q	E	A	H	D	M	A	L	V	A	H	L	A	A	I	E	S	N	V	P	F	M	H	F	F	D	G	F	R	T	S	H	E	I	Q	K	I	E	V	L	D	Y	A	D	M	A	S	L	V	N	Q	K	A	L	A	E	F	R	A	K
Template Known Secondary structure		T	T	T	S	.	.	.	.	.	.	S								S																												T	T	T	T	T	S																	S
Template Predicted Secondary structure						.	.	.	.	.	.
Template SS confidence
		133	.	.	.							.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		787	.	.	790	.	.	.	.	.	.	.	.	.	800																																				.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	S	S	L	E	E	L	A	N	G	T	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	I	G	E	I	D	E	L	D	P	K	G	V	K	R	V	V	M	C	S	G	K	V	Y	Y	D	L	L	E	Q
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	M	N	P	E	H	P	H	V	R	G	T	A	Q	N	P	D	I	Y	F	Q	G	R	E	A	A	N	P	Y	Y	L	K	V	P	G	I	V	A	E	Y	M	Q	K	V	A	S	L	T	G	R	S	Y	K	L	F	D	Y	V	G	A	P	D	A	E	R	V	I	V	S	M	G	S	S	C	E	T	I	E	E	V
Template Known Secondary structure		S			T	T	S					S					T	T	T							T	T																							S					S							T	T		S							T	T
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		832	.			.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		R	R	.	.	K	N	N	Q	H	D	V	A	I	V	R	I	E	Q	L	Y	P	F	P	H	K	A	M	Q	E	V	L	Q	Q	F	A	H	V	K	D	F	V	W	C	Q	E	E	P	L	N	Q	G	A	W
Query Conservation				.	.
Alig confidence				.	.																														.	.	.
Template Conservation																																			.	.	.
Template Sequence		I	N	H	L	A	A	K	G	E	K	I	G	L	I	K	V	R	L	Y	R	P	F	V	S	E	A	F	F	A	A	L	P	A	.	.	.	S	A	K	V	I	T	V	L	D	R	T	K	E	P	G	A	P
Template Known Secondary structure							T	T	T									S				S									S	S		T	.	.	.	T									S	S			T	T		S
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.				320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions