 |
Job Description | P0AFG3 | Confidence | 96.48% | Date | Wed Jan 25 15:20:33 GMT 2012 |
Rank | 83 | Aligned Residues | 107 |
% Identity | 16% | Template | c1ozhD_ |
PDB info |
PDB header:lyase | Chain: D: PDB Molecule:acetolactate synthase, catabolic; |
PDBTitle: the crystal structure of klebsiella pneumoniae acetolactate2 synthase with enzyme-bound cofactor and with an unusual3 intermediate.
|
Resolution | 2.00 Å |
|
 |
  |   |
328 | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | V | V | I | G | S | V | R | A | R | L | D | R | L | D | E | P | S | S | N | K | V | L | P | I | T | I | H | G | D | A | A | V | T | G | Q | G | V | V | Q | E | T | L | N | M | S | K | A | R | G | Y | E | V | G | G | T | V | R | I | V | I | N | N | Q | V | G | F | T | T | S | N | P | L | D | A | R | S | T | P | Y |
Query Conservation |   |
|
|
|   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|   |   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . |   |
|
|   |
|   |
|
|
|
|
| . | . | . | . | . |   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | W | A | I | G | A | W | L | V | N | P | E | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
K | V | V | S | V | S | G | D | G | G | F | . |
. |
. |
. |
. |
L | Q | S | S | M | E | L | E | T | A | V | R | L | K | A | N | V | L | H | L | I | W | V | D | N | G | Y | N | M | V | A | I | Q | E | E | K | K | Y | Q | R | L | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | S | T | T | S | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  | T | T |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |
| S | B |
|  |  |  |  |  |  |  |  |  |  |  | S | S |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|  |  |  | . | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
427 | . | . | 430 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
440 | . | . | . | . | . | . | . | . | . | 450 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . |
  |
  |   |
408 | . | |
|
|
|
|
|
|
|
410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . |
Predicted Secondary structure |   |
 |  | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | T | . |
. |
. |
. |
. |
. |
. |
. |
D | I | G | K | M | V | Q | A | P | I | F | H | V | N | A | D | D | P | E | A | V | A | F | V | T | R | L | A | L | D | F | R | N | T | F | K | R | D | V | F | I | D | L | V | C |
Query Conservation |   |
  |
| . | . | . | . | . | . | . | . |
|
|
|
|   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |
|   |   |
|
|   |
|
|
|   |   |
|   |
|
|
|
|
|
|
|
|   |
Alig confidence |   |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |
|   |   |   |   |   |
|   | . | . |   |   |   |
|
|   |   |
|
|   |   |
|   | . | . | . | . |   |   |   |
|
|   |
|
|
|
|   |
|
Template Sequence |   |
G | V | E | F | G | P | M | D | F | K | A | Y | A | E | S | F | G | A | K | G | F | A | V | E | . |
. |
S | A | E | A | L | E | P | T | L | R | A | A | M | . |
. |
. |
. |
D | V | D | G | P | A | V | V | A | I | P | V |
Template Known Secondary structure |   |
S |
| B |
|
|
|
|
|  |  |  |  |  |  | T | T | T | S |  |  |  |  |
|
| . | . | S | T | T | T |  |  |  |  |  |  |  |  |  | . | . | . | . |  |
| S | S |
|  |  |  |  |  |  | B |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
493 | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | |
|
. | . | . | 520 | . | . | . | . | . | . | . | . | . | |
|
|
|
530 | . | . | . | . | . | . | . | . | . | 540 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|