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Job DescriptionP0AFG3
Confidence100.00%DateWed Jan 25 15:20:33 GMT 2012
Rank19Aligned Residues315
% Identity16%Templatec1ni4D_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:pyruvate dehydrogenase e1 component: beta PDBTitle: human pyruvate dehydrogenase
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   590.........600.........610.........620.........630.........640.........650.........660.........
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Query Sequence  LFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEY
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Template Sequence  QVTVRDAINQGXDEELERDEKVFLLGEEVA. . . . . . . . . . . . . . QYDGAYKVSRGLWKKYGDKRIIDTPISEXGFAGIAV
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   2.......10.........20.........30. ........40.........50.........60.......
 
   670.........680.........690.........700......... 710.........720.........730.........740.......
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Query Sequence  GYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKWG. . RMCGLVMLLPHGYEGQGPEHSSARLERYLQLCAEQNMQ
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Template Sequence  GAAXAGLRPIC. . EFXTFNFSXQAIDQVINSAAKTYYXSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWY. . GHCPGLK
Template Known Secondary structure  TT
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   68.70........ .80.........90.........100.........110.........120.........130...... ...140...
 
   748.750.........760.........770.........780.........790.........800.........810.........820.......
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Query Sequence  VCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAIGEIDELDPKGVKRVVMCSGKVYYD
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Template Sequence  VVSPWNSEDAKGLIKSAIRDN. . NPVVVLENELXYGVPFEF. . PPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHC
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   144.....150.........160.... .....170.........180.. .......190.........200.........210.........
 
   828.830... ......840.........850.........860.........870.........880.........890.... .....900...
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Query Sequence  LLEQRR. KNNQHDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIP. . . FGASLRYAG
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Template Sequence  LEAAAVLSKEGVECEVINXRTIRPXDXETIEASVXK. . . TNHLVTVEGGWPQFGVGAEICARIXEGPAFNFLDAPAVRVT
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   220.........230.........240.........250..... ....260.........270.........280.........290......
 
   904.....910.........920 .........
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Query Sequence  RPASASPAVGYMSVHQK. QQQDLVNDA
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Template Sequence  GADVPXPYAKILEDNSIPQVKDIIFAI
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   297..300.........310.........320...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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