Job Description P0AFG3 Confidence 100.00% Date Wed Jan 25 15:20:33 GMT 2012 Rank 12 Aligned Residues 491 % Identity 13% Template c1itzC_ PDB info PDB header:transferase Chain: C: PDB Molecule:transketolase; PDBTitle: maize transketolase in complex with tpp Resolution 2.30 Å

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		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.								.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.																																					.
Query SS confidence																											.	.	.	.	.	.	.																																					.
Query Sequence		F	N	P	S	H	L	E	I	V	S	P	V	V	I	G	S	V	R	A	R	L	D	R	L	D	.	.	.	.	.	.	.	E	P	S	S	N	K	V	L	P	I	T	I	H	G	D	A	A	V	T	G	Q	G	V	V	Q	E	T	L	N	M	S	K	A	R	G	Y	.	E	V	G	G	T	V	R	I	V	I	N
Query Conservation																											.	.	.	.	.	.	.																																					.
Alig confidence																											.	.	.	.	.	.	.												.	.							.																	.			.	.	.
Template Conservation																																													.	.							.																				.	.	.
Template Sequence		V	T	T	G	P	L	G	Q	G	I	A	N	A	V	G	L	A	L	A	E	K	H	L	A	A	R	F	N	K	P	D	S	E	I	V	D	H	Y	T	Y	V	I	L	.	.	G	D	G	C	Q	M	.	E	G	I	A	N	E	A	C	S	L	A	G	H	W	G	L	G	K	L	.	.	.	I	A	F	Y	D	D
Template Known Secondary structure		S				S	T	T																						B	T	T	B												.	.							.	S														T		T	T		.	.	.
Template Predicted Secondary structure																																													.	.							.																				.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.			.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.			.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		N	Q	V	G	F	T	T	S	N	P	L	D	A	R	S	T	P	Y	C	T	D	I	G	K	M	V	Q	A	P	I	F	H	V	N	A	D	D	.	.	P	E	A	V	A	F	V	T	R	L	A	L	D	F	R	N	T	F	K	R	D	V	F	I	D	L	V	C	Y	R	R	H	G	H	N	E	A	D	E	P	S
Query Conservation																																							.	.
Alig confidence									.	.																													.	.												.	.	.
Template Conservation									.	.																																										.	.	.
Template Sequence		N	H	I	S	I	D	G	.	.	D	T	E	I	A	F	T	E	D	V	S	T	R	F	E	A	L	G	W	H	T	I	W	V	K	N	G	N	T	G	Y	D	D	I	R	A	A	I	K	E	A	.	.	.	K	A	V	T	D	K	P	T	L	I	K	V	T	T	T	I	G	F	G	S	P	N	K	A	N	S	Y
Template Known Secondary structure			S			T	T		.	.		G	G	G	T			S									T	T							S		T	T	T													.	.	.					S	S										T	T	T	T		T	T	T	T	T	S	G
Template Predicted Secondary structure									.	.																																										.	.	.
Template SS confidence
		198	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
							468	.	470	.	.	.	.	.	.	.	.	.	480	.			.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure		.	.	.	.	.															.	.
Query SS confidence		.	.	.	.	.															.	.
Query Sequence		.	.	.	.	.	A	T	Q	P	L	M	Y	Q	K	I	K	K	H	P	.	.	T	P	R	K	I	Y	A	D	K	L	E	Q	E	K	V	A	T	L	E	D	A	T	E	M	V	N	L	Y	R	D	A	L	D	A	G	D	C	V	V	A	E	W	R	P	M	N	M	H	S	F	T	W	S	P	Y	L	N	H	E
Query Conservation		.	.	.	.	.															.	.
Alig confidence		.	.	.	.	.															.	.
Template Conservation
Template Sequence		S	V	H	G	S	A	L	G	A	K	E	V	E	A	T	R	Q	N	L	G	W	P	Y	D	T	F	F	V	P	E	D	V	K	S	H	W	S	R	H	T	P	E	G	A	A	L	E	A	D	W	N	A	K	F	A	E	Y	E	K	K	Y	A	D	D	A	A	T	L	K	S	I	I	T	G	E	L	P	T	G	W
Template Known Secondary structure		G	G	T	S	S															T					T	T											T	T																							S																	T	T	G
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		541	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620
Predicted Secondary structure
Query SS confidence
Query Sequence		W	D	E	E	Y	P	N	K	V	E	M	K	R	L	Q	E	L	A	K	R	I	S	T	V	P	E	A	V	E	M	Q	S	R	V	A	K	I	Y	G	D	R	Q	A	M	A	A	G	E	K	L	F	D	W	G	G	A	E	N	L	A	Y	A	T	L	V	D	E	G	I	P	V	R	L	S	G	E	D	S	G	R
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	A	L	P	K	Y	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	S	P	G	D	A	T	R	N	L	S	Q	Q	C	L	N	A	L	A	N	V	V	P	G	L	I	G	G	S	A	D	L	A	S
Template Known Secondary structure		G	G	G	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S			B																		T	T						S	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		353	.	.	.	.	.	.	360																																						.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
		621	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	F	F	H	R	H	A	V	I	H	N	Q	S	N	G	S	T	Y	T	P	L	Q	H	I	H	N	G	Q	G	A	F	R	V	W	D	S	V	L	S	E	E	A	V	L	A	F	E	Y	G	Y	A	T	A	E	P	R	T	L	T	I	W	E	A	Q	F	G	D	F	A	N	G	A	Q	V	V	I	D	Q	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.					.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.					.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	S	N	M	T	L	L	K	M	F	G	D	F	Q	K	D	T	A	E	E	R	N	V	R	F	G	V	R	E	H	G	M	G	A	I	C	N	G	I	A	L	H	S	P	G	F	V	P	Y	C	A	T	.	F	F	V	F	.	.	.	T	D	Y	M	R	G	A	M
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.			T				T	T			B			T	T		T	T			B					S																	T	T								.		G	G	G	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.					.	.	.
Template SS confidence
															396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.		.	.	.	450				.	.	.	.	.	.	.	.
		701	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.				.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.		.	.	.	.	.
Predicted Secondary structure																							.	.	.																																																			.
Query SS confidence																							.	.	.																																																			.
Query Sequence		I	S	S	G	E	Q	K	W	G	R	M	C	G	L	V	M	L	L	P	H	G	.	.	.	Y	E	G	Q	G	P	E	H	S	S	A	R	L	E	R	Y	L	Q	L	C	A	E	Q	N	M	Q	V	C	V	P	S	T	P	A	Q	V	Y	H	M	L	R	R	Q	A	L	R	G	M	R	R	.	P	L	V	V	M
Query Conservation																							.	.	.																																																			.
Alig confidence					.	.	.	.															.	.	.																		.	.																													.	.		.
Template Conservation					.	.	.	.																																			.	.																													.	.
Template Sequence		R	I	S	.	.	.	.	A	L	S	E	A	G	V	I	Y	V	M	T	H	D	S	I	G	L	G	E	D	G	P	T	H	Q	P	I	E	H	L	V	S	F	.	.	R	A	M	P	N	I	L	M	L	R	P	A	D	G	N	E	T	A	G	A	Y	K	V	A	V	L	N	R	.	.	K	R	P	S	I	L	A
Template Known Secondary structure					.	.	.	.				T											S	G	G	G		T	T		T	T	T			S	S						.	.		T	S	T	T								S															T	.	.	T	S
Template Predicted Secondary structure					.	.	.	.																																			.	.																													.	.
Template SS confidence
		459	460	.					.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.			.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.			.	.	.	.	.	.	530
		777	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.		.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		S	P	K	S	L	L	R	H	P	L	A	V	S	S	L	E	E	L	A	N	G	T	F	L	P	A	I	G	E	I	D	E	L	D	P	K	G	V	K	R	V	V	M	C	S	G	K	V	Y	Y	D	L	L	E	Q	R	R	.	K	N	N	Q	H	D	V	A	I	V	R	I	E	Q	L	Y	P	F	P	H	K	A
Query Conservation																																																											.
Alig confidence												.															.	.	.																														.
Template Conservation												.															.	.	.
Template Sequence		L	S	R	Q	K	L	P	H	L	P	.	G	T	S	I	E	G	V	E	K	G	G	Y	T	I	.	.	.	S	D	N	S	T	G	N	K	P	D	L	I	V	M	G	T	G	S	E	L	E	I	A	A	K	A	A	D	E	L	R	K	E	G	K	T	V	R	V	V	S	F	V	S	W	E	L	F	D	E	Q	S
Template Known Secondary structure				S	S		B				T	.	T								T	S	S				.	.	.					S	T	T			S							G	G	G														T	T									S								S
Template Predicted Secondary structure												.															.	.	.
Template SS confidence
		531	.	.	.	.	.	.	.	.	540		.	.	.	.	.	.	.	.	.	550	.	.	.	.				.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
		856	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	E	V	L	Q	Q	F	A	H	V	K	D	F	V	W	C	Q	E	E	P	L	N	Q	G	A	W	Y	C	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	E	Y	K	E	S	V	L	P	A	A	V	T	A	R	I	S	I	E	A	G	S	T	L	G	W	Q	K	Y	V
Template Known Secondary structure									S		T	T									S	S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.