Job Description P0AGC3 Confidence 83.98% Date Thu Jan 5 11:28:44 GMT 2012 Rank 117 Aligned Residues 209 % Identity 11% Template d2onda1 SCOP info alpha-alpha superhelix TPR-like HAT/Suf repeat Resolution 2.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.												.	.	.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query Sequence		V	T	N	F	V	R	A	N	P	T	L	P	P	A	R	T	L	Q	S	R	F	V	N	E	L	A	R	.	.	.	.	.	.	.	.	.	.	.	R	E	D	W	R	G	L	L	A	F	S	P	E	.	.	.	.	.	K	P	G	T	T	E	A	Q	C	N	Y	Y	Y	A	K	W	N	T	G	Q	S	E	E	A
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation
Template Sequence		Y	E	Q	C	L	L	V	L	G	H	H	P	D	I	W	Y	E	A	A	Q	Y	L	E	Q	S	S	K	L	L	A	E	K	G	D	X	N	N	A	K	L	F	S	D	E	A	A	N	I	Y	E	R	A	I	S	T	L	L	K	K	N	X	L	L	Y	F	A	Y	A	D	Y	E	E	S	R	X	K	Y	E	K	V
Template Known Secondary structure										T	T																						T	S																					T	T	T	T	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	G	A	K	E	L	W	L	T	G	K	S	Q	P	N	A	C	D	K	L	F	S	V	W	R	A	S	G	K	Q	D	P	L	A	Y	L	E	R	I	R	L	A	M	K	A	G	N	T	G	L	V	T	V	L	A	G	Q	M	P	A	D	Y	Q	T	I	A	S	A	I	I	S	L	A	N	N	P	N	T	V
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	S	I	Y	N	R	L	L	A	I	E	D	I	D	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	S	S	S	S		T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	F	A	R	T	T	G	A	T	D	F	T	R	Q	M	A	A	V	A	F	A	S	V	A	R	Q	D	A	E	N	A	R	L	M	I	P	S	L	A	Q	A	Q	Q	L	N	E	D	Q	I	Q	E	L	R	D	I	V	A	W	R	L	M	G	N	D	V	T	D	E	Q	A	K	W	R	D	D	A	I	M	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	Y	I	Q	Y	X	K	F	A	R	R	A	E	G	I	K	S	G	R	X	I	F	K	K	A	R	E	D	A	R	T	R	H	H	V	Y	V	T	A	A	L	X	E	Y	Y	.	.	.	C	S	K	D	K	S	V	A	F	K	I	F	E	L	G	L	K	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																												T	S	T	T			T													.	.	.	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Template SS confidence
															376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.				.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
			309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.						.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure		.																																								.	.	.	.	.
Query SS confidence		.																																								.	.	.	.	.
Query Sequence		.	S	Q	S	T	S	L	I	E	R	R	V	R	M	A	L	G	T	G	D	R	R	G	L	N	T	W	L	A	R	L	P	M	E	A	K	E	K	D	E	.	.	.	.	.	W	R	Y	W	Q	A	D	L	L	L	E	R	G	R	E	A	E	A	K	E	I	L	H	Q	L	M	Q
Query Conservation		.																																								.	.	.	.	.
Alig confidence		.																																								.	.	.	.	.						.
Template Conservation																																																				.
Template Sequence		Y	G	D	I	P	E	Y	V	L	A	Y	I	D	Y	L	S	H	L	N	E	D	N	N	T	R	V	L	F	E	R	V	L	T	S	G	S	L	P	P	E	K	S	G	E	I	W	A	R	F	L	.	A	F	E	S	N	I	G	D	L	A	S	I	L	K	V	E	K	R	R	F	T
Template Known Secondary structure			T	T														T	T																S	S	S	S		G	G	G										.							S
Template Predicted Secondary structure																																																				.
Template SS confidence
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions