Job Description P0AGC3 Confidence 98.45% Date Thu Jan 5 11:28:44 GMT 2012 Rank 21 Aligned Residues 309 % Identity 11% Template c3iegB_ PDB info PDB header:chaperone Chain: B: PDB Molecule:dnaj homolog subfamily c member 3; PDBTitle: crystal structure of p58(ipk) tpr domain at 2.5 a Resolution 2.51 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	Q	R	S	R	Y	A	Q	I	K	Q	A	W	D	N	R	Q	M	D	V	V	E	Q	M	M	P	G	L	K	D	Y	P	L	Y	P	Y	L	E	Y	R	Q	I	T	D	D	L	M	N	Q	P	A	V	T	V	T	N	F	V	R	A	N	P	T	L	P	P	A	R	T	L	Q	S	R	F	V	N	E	L	A
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Sequence		A	D	V	E	K	H	L	E	L	G	K	K	L	L	A	A	G	Q	L	A	D	A	L	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	H	A	A	V	D	G	D	P	D	N	Y	I	A	Y	Y	R	R	A	T	V	F	L	A	.	.
Template Known Secondary structure																	T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T															.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																														60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		R	R	E	D	W	R	G	L	L	A	F	S	P	E	.	.	.	.	K	P	G	T	T	E	A	Q	C	N	Y	Y	Y	A	K	W	N	T	G	Q	S	E	E	A	W	Q	G	A	K	E	L	W	L	T	G	K	S	Q	P	N	A	C	D	K	L	F	S	V	W	R	A	S	G	K	Q	D	P	L	A	Y	L	E
Query Conservation																.	.	.	.
Alig confidence		.														.	.	.	.																																																				.	.	.
Template Conservation		.																																																																					.	.	.
Template Sequence		.	X	G	K	S	K	A	A	L	P	D	L	T	K	V	I	A	L	K	X	D	F	T	A	A	R	L	Q	R	G	H	L	L	L	K	Q	G	K	L	D	E	A	E	D	D	F	K	K	V	L	K	S	N	P	S	E	Q	E	E	K	E	A	E	S	Q	L	V	K	A	.	.	.	D	E	X	Q	R	L	R	S
Template Known Secondary structure		.	T	T																	T	T																T														T	T																		.	.	.
Template Predicted Secondary structure		.																																																																					.	.	.
Template SS confidence
			84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.				.	.	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.								.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.																																							.
Query SS confidence																							.	.	.	.	.	.	.																																							.
Query Sequence		R	I	R	L	A	M	K	A	G	N	T	G	L	V	T	V	L	A	G	Q	M	.	.	.	.	.	.	.	P	A	D	Y	Q	T	I	A	S	A	I	I	S	L	A	N	N	P	N	T	V	L	T	F	A	R	T	T	G	A	T	D	F	T	R	Q	M	A	.	A	V	A	F	A	S	V	A	R	Q	D	A	E
Query Conservation																							.	.	.	.	.	.	.																																							.
Alig confidence																							.	.	.	.	.	.	.																																							.
Template Conservation
Template Sequence		Q	A	L	D	A	F	D	G	A	D	Y	T	A	A	I	T	F	L	D	K	I	L	E	V	C	V	W	D	A	E	L	R	E	L	R	A	E	C	F	I	K	E	G	E	P	R	K	A	I	S	D	L	K	A	A	S	K	L	K	S	D	N	T	E	A	F	Y	K	I	S	T	L	Y	Y	Q	L	G	D	H	E
Template Known Secondary structure									T	T														T	T	S	T	T																T															S		S																	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.									.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.						.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.																											.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.																											.	.	.	.	.
Query Sequence		N	A	R	L	M	I	P	S	L	A	Q	A	Q	Q	L	N	E	D	Q	I	Q	E	L	R	D	I	V	.	.	.	.	.	.	.	.	A	W	R	L	M	G	N	D	V	T	D	E	Q	A	K	W	R	D	D	A	I	M	R	S	Q	S	.	.	.	.	.	T	S	L	I	E	R	R	V	R	M	A	L	G	T
Query Conservation																													.	.	.	.	.	.	.	.																											.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.																											.	.	.	.	.
Template Conservation
Template Sequence		L	S	L	S	E	V	R	E	C	L	K	L	D	Q	D	H	K	R	C	F	A	H	Y	K	Q	V	K	K	L	N	K	L	I	E	S	A	E	E	L	I	R	D	G	R	Y	T	D	A	T	S	K	Y	E	S	V	X	K	T	E	P	S	V	A	E	Y	T	V	R	S	K	E	R	I	C	H	C	F	S	K	D
Template Known Secondary structure															T	T																											T	T																S		S																			T
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	R	R	G	L	N	T	W	L	A	R	L	P	M	E	A	K	E	K	D	E	W	R	Y	W	Q	A	D	L	L	L	E	R	G	R	E	A	E	A	K	E	I	L	H	Q	L	M	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	K	P	V	E	A	I	R	I	C	S	E	V	L	Q	X	E	P	D	N	V	N	A	L	K	D	R	A	E	A	Y	L	I	E	E	X	Y	D	E	A	I	Q	D	Y	E	A	A	Q	E
Template Known Secondary structure		T																	T	T															T	T														T
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions