Job Description P0AGC3 Confidence 98.81% Date Thu Jan 5 11:28:44 GMT 2012 Rank 12 Aligned Residues 248 % Identity 8% Template c3cvpA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:peroxisome targeting signal 1 receptor pex5; PDBTitle: structure of peroxisomal targeting signal 1 (pts1) binding2 domain of trypanosoma brucei peroxin 5 (tbpex5)complexed3 to pts1 peptide (10-skl) Resolution 2.00 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																				.	.	.	.
Query SS confidence																				.	.	.	.
Query Sequence		N	E	L	A	R	R	E	D	W	R	G	L	L	A	F	S	P	E	.	.	.	.	K	P	G	T	T	E	A	Q	C	N	Y	Y	Y	A	K	W	N	T	G	Q	S	E	E	A	W	Q	G	A	K	E	L	W	L	T	G	K	S	Q	P	N	A	C	D	K	L	F	S	V	W	R	A	S	G	K	Q	D	P	L
Query Conservation																				.	.	.	.
Alig confidence																				.	.	.	.
Template Conservation
Template Sequence		L	S	M	L	K	L	A	N	L	A	E	A	A	L	A	F	E	A	V	C	Q	A	A	P	E	R	E	E	A	W	R	S	L	G	L	T	Q	A	E	N	E	K	D	G	L	A	I	I	A	L	N	H	A	R	M	L	D	P	K	D	I	A	V	H	A	A	L	A	V	S	H	T	N	E	H	N	A	N	A	A
Template Known Secondary structure							T	T																	T	T															T	T																	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	L	E	R	I	R	L	A	M	K	A	G	N	T	G	L	V	T	V	L	A	G	Q	M	P	A	D	Y	Q	T	I	A	S	A	I	I	S	L	A	N	N	P	N	T	V	L	T	F	A	R	T	T	G	A	T	D	F	T	R	Q	M	A	A	V	A	F	A	S	V	A	R	Q	D	A	E	N	A	R	L
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	S	L	R	A	W	L	L	S	Q	P	Q	Y	E	Q	F	F	F	A	A	P	N	E	Y	R	E	C	R	T	L	L	H	A	A	L	E	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	P	N	D	A	Q	L	H	A	S	L	G	V	L	Y	N	L	S	N	N	Y	D	S	A	A	A
Template Known Secondary structure											T	S	T	T	T					T	T	S																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T															T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.																	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	P	S	L	A	Q	A	Q	Q	L	N	E	D	Q	I	Q	E	L	R	D	I	V	A	W	R	L	M	G	N	D	V	T	D	E	Q	A	K	W	R	D	D	A	I	M	R	S	Q	S	T	S	L	I	E	R	R	V	R	M	A	L	G	T	G	D	R	R	G	L	N	T	W	L	A	R	L	P	M	E	A
Query Conservation
Alig confidence																											.	.	.
Template Conservation																											.	.	.
Template Sequence		N	L	R	R	A	V	E	L	R	P	D	D	A	Q	L	W	N	K	L	G	A	T	L	A	N	.	.	.	G	N	R	P	Q	E	A	L	D	A	Y	N	R	A	L	D	I	N	P	G	Y	V	R	V	M	Y	N	M	A	V	S	Y	S	N	M	S	Q	Y	D	L	A	A	K	Q	L	V	R	A	I	Y	M	Q
Template Known Secondary structure											T	T															.	.	.	T	T																	T	T															T	T
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.				.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	K	D	E	W	R	Y	W	Q	A	D	L	L	L	E	R	G	R	E	A	E	A	K	E	I	L	H	Q	L	M	Q
Query Conservation
Alig confidence										.
Template Conservation										.
Template Sequence		V	T	R	S	M	W	D	F	.	F	R	M	L	L	N	V	M	N	R	P	D	L	V	E	L	T	Y	A	Q	N	V	E
Template Known Secondary structure										.								T	T								G	G	G	T		S
Template Predicted Secondary structure										.
Template SS confidence
		599	600	.	.	.	.	.	.		.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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