Job Description P0AGC3 Confidence 44.00% Date Thu Jan 5 11:28:44 GMT 2012 Rank 136 Aligned Residues 103 % Identity 11% Template c1ltxA_ PDB info PDB header:transferase/protein binding Chain: A: PDB Molecule:rab geranylgeranyltransferase alpha subunit; PDBTitle: structure of rab escort protein-1 in complex with rab2 geranylgeranyl transferase and isoprenoid Resolution 2.70 Å

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		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.		.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.											.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																															.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	E	L	R	D	I	V	A	W	R	L	M	G	N	D	V	T	D	E	Q	A	K	W	R	D	D	A	I	M	.	R	S	Q	S	T	S	L	I	E	R	R	V	R	M	A	L	G	T	G	D	.	.	.	.	.	.	.	.	.	.	R	R	G	L	N	T	W	L	A	R	L	P	M	E	A	K	E	K	D	E
Query Conservation																															.																					.	.	.	.	.	.	.	.	.	.
Alig confidence																															.																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	S	A	T	Q	A	V	F	Q	K	R	Q	A	G	E	L	D	E	S	V	L	E	L	T	S	Q	I	L	G	A	N	P	D	F	A	T	L	W	N	C	R	R	E	V	L	Q	H	L	E	T	E	K	S	P	E	E	S	A	A	L	V	K	A	E	L	G	F	L	E	S	C	L	R	V	N	P	K	S	Y	G
Template Known Secondary structure														S				S	S	T	T												T	T												G	G	G	S	S	S	S	S		T	T	T																				S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		348	.	350	.	.	.	.	.	.	.	.	.	360	.			.	.	.	.	.	.	.	.	370	.	.	.	.			.	.	.	.	.	380	.
Predicted Secondary structure																.	.														.	.
Query SS confidence																.	.														.	.
Query Sequence		W	R	Y	W	Q	A	D	L	L	L	E	R	G	R	.	.	E	A	E	A	K	E	I	L	H	Q	L	M	Q	.	.	Q	R	G	F	Y	P	M
Query Conservation																.	.														.	.
Alig confidence																.	.														.	.
Template Conservation
Template Sequence		T	W	H	H	R	C	W	L	L	S	R	L	P	E	P	N	W	A	R	E	L	E	L	C	A	R	F	L	E	A	D	E	R	N	F	H	C	W
Template Known Secondary structure														S	S		T																T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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