Job Description P09155 Confidence 98.30% Date Thu Jan 5 11:02:04 GMT 2012 Rank 27 Aligned Residues 192 % Identity 14% Template d2hhva2 SCOP info DNA/RNA polymerases DNA/RNA polymerases DNA polymerase I Resolution 1.55

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		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.																		.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Query Sequence		P	A	A	L	D	E	C	R	L	M	Q	M	R	R	Q	E	V	V	A	P	E	D	A	W	R	D	I	T	N	A	W	Q	L	R	T	R	Q	L	A	C	L	Q	L	L	A	D	W	R	L	R	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	R	D	L	A	V	N	F	.	.
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation
Template Sequence		D	R	L	L	V	E	L	E	Q	P	L	S	S	I	L	A	E	M	E	F	A	G	V	K	V	D	T	K	R	L	E	Q	M	G	K	E	L	A	E	Q	L	G	T	V	E	Q	R	I	Y	E	L	A	G	Q	E	F	N	I	N	S	P	K	Q	L	G	V	I	L	F	E	K	L	Q	L	P	V	L	K	K	T
Template Known Secondary structure							T	T																																														T	S				T	T											T	T	S							B
Template Predicted Secondary structure
Template SS confidence
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
						238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.																		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	V	V	R	E	E	H	L	W	S	V	A	R	Y	M	P	G	S	L	G	E	L	D	S	L	G	L	S	G	S	E	I	R	F	H	G	K	T	L	L	A	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	A	Q	T	L	P	E	D	A	L	P	Q	P	M	L	N
Query Conservation		.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.
Template Sequence		K	T	G	Y	S	T	S	A	D	V	L	E	K	L	A	P	Y	H	E	I	.	V	E	N	I	L	H	Y	R	Q	L	G	K	L	Q	S	T	Y	I	E	G	L	L	K	V	V	R	P	D	T	K	K	V	H	T	I	F	N	Q	A	L	T	Q	T	G	R	L	S	S	T	E	P	N	L	Q	N	I	P	I	R
Template Known Secondary structure		S	S	S	B											G	G	G				.																T	T	T							S		T	T	T									S	S			S	S	S						S	S		T	T					S
Template Predicted Secondary structure																						.
Template SS confidence
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570		.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																		.
Query SS confidence																		.
Query Sequence		L	M	D	M	P	G	Y	R	K	A	F	K	A	I	K	S	.	L	I	T	D	V	S	E	T	H	K	I	S	A	E	L	L	A	S	R	R	Q	I	N	Q	L	L	N	W	H	W	K	L	K	P	Q	N	N	L	P	E	L	I	S	G	W	R	G	E	L	M	A	E	A	L	H	N	L	L	Q	E	Y	P	Q
Query Conservation																		.
Alig confidence																		.																																									.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.
Template Sequence		L	E	E	G	R	K	I	R	Q	A	F	V	P	S	E	S	D	W	L	I	F	A	A	D	Y	S	Q	I	E	L	R	V	L	A	H	I	A	E	D	D	N	L	M	E	A	F	R	R	D	L	D	I	H	T	K	T	A	.	.	.	.	.	.	M	D	I	F	Q	V	S	E	D	E	V	T	P	N	M	R	R
Template Known Secondary structure		S					G	G	G	G	G				S	S	T	T									S	S											T										T	T									.	.	.	.	.	.					T			G	G	G
Template Predicted Secondary structure																																																											.	.	.	.	.	.
Template SS confidence
		630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.							.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions