Job Description P09155 Confidence 97.99% Date Thu Jan 5 11:02:04 GMT 2012 Rank 31 Aligned Residues 139 % Identity 20% Template d2f96a1 SCOP info Ribonuclease H-like motif Ribonuclease H-like DnaQ-like 3'-5' exonuclease Resolution 2.09

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.								.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																																		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	V	R	A	F	P	A	I	A	L	D	T	E	F	V	R	T	R	T	Y	Y	P	Q	L	G	L	I	Q	L	F	D	.	.	.	.	.	.	.	G	E	H	L	A	L	I	D	P	L	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																		.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.							.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.
Template Sequence		R	R	F	R	G	Y	L	P	V	V	V	D	V	E	T	G	G	F	N	S	A	T	D	A	.	.	L	L	E	I	A	A	T	T	V	G	X	D	E	K	G	F	L	F	P	E	H	T	Y	F	F	R	I	E	P	F	E	G	A	N	I	E	P	A	A	L	E	F	T	G	I	K	L	D	H	P	L	R	X	A
Template Known Secondary structure				T	T	T											S	S	S		T	T	T	B		.	.													T	T	S												B				T	T		B										T			T	T		T	T
Template Predicted Secondary structure																										.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
						61	.	.	.	.	.	.	.	.	70	.	.								.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.									.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure		.	.	.	.													.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.													.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	T	D	W	S	P	L	K	A	I	L	R	D	.	.	.	.	.	.	.	P	S	I	T	K	F	L	H	A	G	S	E	D	L	E	V	F	L	N	V	F	G	.	.	.	.	.	.	.	.	E	L	P	Q	P	L	I	D	T	Q	I	L	A	A	F	C	G	R	P	M	S	W	G	F	A	S	M
Query Conservation		.	.	.	.													.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.													.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.																			.	.
Template Conservation																																																																									.	.
Template Sequence		V	Q	E	E	A	A	L	T	E	I	F	R	G	I	R	K	A	L	K	A	N	G	C	K	R	A	I	L	V	G	H	N	S	S	F	D	L	G	F	L	N	A	A	V	A	R	T	G	I	K	R	N	P	F	H	P	F	S	S	F	D	T	A	T	L	A	G	L	A	Y	G	.	.	Q	T	V	L	A	K	A
Template Known Secondary structure		B																				T	T		S							T	T																T																							S	.	.			S
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	E	Y	S	G	V	T	L	D	K	S	E	S	R	T	D	W	L	A	R	P	L	T	E	R	Q	C	E	Y	A	A	A	D	V	W	Y	L	L	P	I	T	A	K	L	M	V	E	T	E	A	S	G
Query Conservation
Alig confidence					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	Q	A	.	A	G	X	E	F	D	N	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	S	A	R	Y	D	T	E	K	T	A	E	L	F	C	G	I	V	N	R	W	K	E	X	G
Template Known Secondary structure					.	T	T					T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									T	T
Template Predicted Secondary structure					.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		180	.	.		.	.	.	.	.	.	.	190	.															.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions