Job Description P09155 Confidence 97.89% Date Thu Jan 5 11:02:04 GMT 2012 Rank 33 Aligned Residues 145 % Identity 16% Template d1uoca_ SCOP info Ribonuclease H-like motif Ribonuclease H-like CAF1-like ribonuclease Resolution 2.3

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.														.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50									.	.	.	.	.									.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.
Query Sequence		D	D	A	L	A	S	L	C	E	A	V	R	A	F	P	A	I	A	L	D	T	E	F	V	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	Y	Y	P	Q	L	G	L	I	Q	L	F	D	G	E	.	.	.	.	.	.	.	.	H	L	A	L	I	.	.	.	.	.	.	.	.	D	P	L	G
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	S	E	F	A	V	I	R	Q	L	V	S	Q	Y	N	H	V	S	I	S	T	E	F	V	G	S	K	V	D	Y	H	Y	Q	T	M	R	A	N	V	D	F	L	N	P	I	Q	L	G	L	S	L	S	D	A	N	G	N	K	P	D	N	G	P	S	T	W	Q	F	N	F	E	F	D	P	K	K	E	I	M	S
Template Known Secondary structure												T	T	T	S																										T	T													T	T					S	S	S		S						B				T	T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		60	.	.	.	.	.	.	.	.																											.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	D	W	S	P	L	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	L	R	D	P	S	I	T	K	F	L	H	A	G	S	E	D	L	E	V	F	L	N	V	F	G	E	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	E	S	L	E	L	L	R	K	S	G	I	N	F	E	K	H	E	N	L	G	I	D	V	F	E	F	S	Q	L	L	M	D	S	G	L	M	M	D	D	S	V	T	W	I	T	Y	H	A	A	Y	D	L	G	F	L	I	N	I	L	M	N	D	S	M	P	N	N	K	E	D	F	E	W	W	V	H	Q	Y	M
Template Known Secondary structure											T	T											B											T	S	S		S	S		T	T	S					S	S	T	T											T	T	S				S	S
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																			.																.
Query SS confidence																			.																.
Query Sequence		Q	P	L	I	D	T	Q	I	L	A	A	F	C	G	R	P	M	.	S	W	G	F	A	S	M	V	E	E	Y	S	G	V	T	.	L	D	K	S	E	S	R	T	D	W	L	A	R	P	L	T	E	R	Q	C	E	Y	A	A	A	D	V	W	Y	L	L	P	I	T	A	K	L	M	V	E	T
Query Conservation																			.																.
Alig confidence																			.											.					.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	N	F	Y	D	L	N	L	V	Y	K	I	I	Q	E	F	K	N	Q	Y	S	L	T	T	L	A	D	E	.	L	G	L	P	R	F	S	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	G	G	Q	S	L	L	M	L	L	S	F	C	Q	L	S	K	L	S
Template Known Secondary structure		S	S												T	T	T					S								.	T	T					G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S																			T
Template Predicted Secondary structure																														.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.																	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions