Job Description P09155 Confidence 97.83% Date Thu Jan 5 11:02:04 GMT 2012 Rank 35 Aligned Residues 190 % Identity 13% Template d1kfsa2 SCOP info DNA/RNA polymerases DNA/RNA polymerases DNA polymerase I Resolution 2.10

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		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.																		.	230	.	.	.	.	.	.	.				.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Query Sequence		A	L	D	E	C	R	L	M	Q	M	R	R	Q	E	V	V	A	P	E	D	A	W	R	D	I	T	N	A	W	Q	L	R	T	R	Q	L	A	C	L	Q	L	L	A	D	W	R	L	R	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	R	D	L	A	V	N	F	.	.	.	V
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation
Template Sequence		V	F	E	N	I	E	M	P	L	V	P	V	L	S	R	I	E	R	N	G	V	K	I	D	P	K	V	L	H	N	H	S	E	E	L	T	L	R	L	A	E	L	E	K	K	A	H	E	I	A	G	E	E	F	N	L	S	S	T	K	Q	L	Q	T	I	L	F	E	K	Q	G	I	K	P	L	K	K	T	P	S
Template Known Secondary structure						T																B		B																											S	S	S				S		T	T	T	T	S					T	T	T	S	S		S							T
Template Predicted Secondary structure
Template SS confidence
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.																		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	R	E	E	H	L	W	S	V	A	R	Y	M	P	G	S	L	G	E	L	D	S	L	G	L	S	G	S	E	I	R	F	H	G	K	T	L	L	A	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	A	Q	T	L	P	E	D	A	L	P	Q	P	M	L	N	L	M	D	M	P
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		T	S	E	E	V	L	E	E	L	A	L	D	Y	P	L	.	P	K	V	I	L	E	Y	R	G	L	A	K	L	K	S	T	Y	T	D	K	L	P	L	M	I	N	P	K	T	G	R	V	H	T	S	Y	H	Q	A	V	T	A	T	G	R	L	S	S	T	D	P	N	L	Q	N	I	P	V	R	N	E	E	G	R
Template Known Secondary structure		T	T								T	T	T				.																	T	T	T	T	G	G	G	G	B		T	T	T	S	S	B						S	S			S	S	S						S	S		G	G	G	S		S	S	S
Template Predicted Secondary structure																	.
Template SS confidence
		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.		.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	R	K	A	F	K	A	I	K	S	L	I	T	D	V	S	E	T	H	K	I	S	A	E	L	L	A	S	R	R	Q	I	N	Q	L	L	N	W	H	W	K	L	K	P	Q	N	N	L	P	E	L	I	S	G	W	R	G	E	L	M	A	E	A	L	H	N	L	L	Q	E	Y	P	Q
Query Conservation
Alig confidence																																																					.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.
Template Sequence		R	I	R	Q	A	F	I	A	P	E	D	Y	V	I	V	S	A	D	Y	S	Q	I	E	L	R	I	M	A	H	L	S	R	D	K	G	L	L	T	A	F	A	E	G	K	D	I	H	R	A	T	A	.	.	.	.	.	.	A	E	V	F	G	L	P	L	E	T	V	T	S	E	Q	R	R
Template Known Secondary structure					T	T	B	B			T	T									T	T										T	T										T	T									.	.	.	.	.	.				T	T			T	T	T
Template Predicted Secondary structure																																																					.	.	.	.	.	.
Template SS confidence
		688	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.							.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions