Job Description P09155 Confidence 100.00% Date Thu Jan 5 11:02:04 GMT 2012 Rank 4 Aligned Residues 287 % Identity 24% Template c3sahA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:exosome component 10; PDBTitle: crystal structure of the human rrp6 catalytic domain with y436a2 mutation in the catalytic site Resolution 2.65 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		M	N	Y	Q	M	I	T	T	D	D	A	L	A	S	L	C	E	A	V	R	A	F	P	A	I	A	L	D	T	E	F	V	R	T	R	T	Y	Y	P	Q	L	G	L	I	Q	L	F	D	G	E	H	L	A	L	I	D	P	L	G	I	.	T	D	W	S	P	L	K	A	I	L	R	D	P	S	I	T	K	F	L
Query Conservation																																																														.
Alig confidence																																																														.
Template Conservation
Template Sequence		T	P	C	H	F	I	S	S	L	D	E	L	V	E	L	N	E	K	L	L	N	C	Q	E	F	A	V	D	L	E	H	H	S	Y	R	S	F	L	G	L	T	C	L	M	Q	I	S	T	R	T	E	D	F	I	I	D	T	L	E	L	R	S	D	M	Y	I	L	N	E	S	L	T	D	P	A	I	V	K	V	F
Template Known Secondary structure		S							S													T		S											T	T		S	S											S	S							T	T	T	T	G	G	G	G	G	G	G					T		T	T	S
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	G	S	E	D	L	E	V	F	L	N	V	F	G	E	L	P	Q	P	L	I	D	T	Q	I	L	A	A	F	C	G	R	P	M	S	W	G	F	A	S	M	V	E	E	Y	S	G	V	T	L	D	K	S	E	S	R	T	D	W	L	A	R	P	L	T	E	R	Q	C	E	Y	A	A	A	D	V	W	Y	L
Query Conservation
Alig confidence																																		.	.	.	.
Template Conservation																																		.	.	.	.
Template Sequence		H	G	A	D	S	D	I	E	W	L	Q	K	D	F	G	L	Y	V	V	N	M	F	D	T	H	Q	A	A	R	L	L	N	.	.	.	.	H	S	L	D	H	L	L	K	L	Y	C	N	V	D	S	N	K	Q	Y	Q	L	A	D	W	R	I	R	P	L	P	E	E	M	L	S	A	A	R	D	D	T	H	Y	L
Template Known Secondary structure		S	S												T					S	S													.	.	.	.		T									S					G	G	G	G					T	T		S	S															S
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.					.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																	.	.	.	.	.																				.											.	.
Query SS confidence																	.	.	.	.	.																				.											.	.
Query Sequence		L	P	I	T	A	K	L	M	V	E	T	E	A	S	G	.	.	.	.	.	W	L	P	A	A	L	D	E	C	R	L	M	Q	M	R	R	Q	E	V	.	V	A	P	E	D	A	W	R	D	I	.	.	T	N	A	W	Q	L	R	T	R	Q	L	A	C	L	Q	L	L	A	D	W	R	L	R	K	A	R	E	R
Query Conservation																	.	.	.	.	.																				.											.	.
Alig confidence																	.	.	.	.	.																				.											.	.
Template Conservation
Template Sequence		L	Y	I	Y	D	K	M	R	L	E	M	W	E	R	G	N	G	Q	P	V	Q	L	Q	V	V	W	Q	R	S	R	D	I	C	L	K	K	F	I	K	P	I	F	T	D	E	S	Y	L	E	L	Y	R	K	Q	K	K	H	L	N	T	Q	Q	L	T	A	F	Q	L	L	F	A	W	R	D	K	T	A	R	R	E
Template Known Secondary structure														T	T	T	T	S	S	S															T																				T	T
Template Predicted Secondary structure
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		D	L	A	V	N	F	V	V	R	E	E	H	L	W	S	V	A	R	Y	M	P	G	S	L	G	E	L	D	S	L	.	G	L	S	G	S	E	I	R	F	H	G	K	T	L	L	A	L	V	E	K	A	Q	T	L	P	E	D	A	L	P
Query Conservation																																.
Alig confidence																																.
Template Conservation
Template Sequence		D	E	S	Y	G	Y	V	L	P	N	H	M	M	L	K	I	A	E	E	L	P	K	E	P	Q	G	I	I	A	C	C	N	P	V	P	P	L	V	R	Q	Q	I	N	E	M	H	L	L	I	Q	Q	A	R	E	M	P	L	L	K	S	E
Template Known Secondary structure		T																					S	S						T	T	S	S	S								T													T	S				T	T	T
Template Predicted Secondary structure
Template SS confidence
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions