Job Description P09155 Confidence 97.46% Date Thu Jan 5 11:02:04 GMT 2012 Rank 44 Aligned Residues 90 % Identity 19% Template c3ikmD_ PDB info PDB header:transferase Chain: D: PDB Molecule:dna polymerase subunit gamma-1; PDBTitle: crystal structure of human mitochondrial dna polymerase2 holoenzyme Resolution 3.24 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.																						110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.
Predicted Secondary structure																										.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence																										.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		F	L	H	A	G	S	E	D	L	E	V	F	L	N	V	F	G	E	L	P	Q	P	L	I	.	.	D	T	Q	I	L	A	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	G	R	P	M	S	W	G	F	A	S	M	V	E	E	Y	S	.	G	V	T	L	D	K	S
Query Conservation																										.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence																										.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		V	G	H	N	V	S	F	D	R	A	H	I	R	E	Q	Y	L	I	Q	G	S	R	M	R	F	L	D	T	M	S	M	H	M	A	I	S	G	L	S	S	F	Q	R	S	L	W	I	A	A	K	Q	G	W	D	W	L	D	I	S	S	V	N	S	L	A	E	V	H	R	L	Y	V	G	G	P	P	L	E	K	E
Template Known Secondary structure						S	T	T	S								T	T	T	T																																T										S	T	T	T	S						T		S	S	T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		134	.												.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	S	.	.	.	.	.	.	.	.	.	.	.	R	T	D	W	L	A	R	P	L	T	E	R	Q	C	E	Y	A	A	A	D	V	W	Y	L	L	P	I	T	A	K	L	M	V	E	T	E	A	S
Query Conservation				.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		P	R	E	L	F	V	K	G	T	M	K	D	I	R	E	N	F	Q	D	.	.	.	.	.	.	L	M	Q	Y	C	A	Q	D	V	W	A	T	H	E	V	F	Q	Q	Q	L	P	L	F	L	E	R
Template Known Secondary structure		S	S	S	G	G	G	S	S		S								T	T	.	.	.	.	.	.																									S	S
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.							.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions