Job Description P09155 Confidence 93.55% Date Thu Jan 5 11:02:04 GMT 2012 Rank 54 Aligned Residues 130 % Identity 18% Template c3cm6A_ PDB info PDB header:hydrolase, apoptosis Chain: A: PDB Molecule:cell death-related nuclease 4; PDBTitle: crystal structure of cell-death related nuclease 4 (crn-4)2 bound with er Resolution 2.60 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.												.	50	.	.	.			.	.	.	.	.	.	60																										.	.	.	.
Predicted Secondary structure																					.							.	.	.	.	.	.	.	.	.	.	.						.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.							.	.	.	.	.	.	.	.	.	.	.						.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	A	L	D	T	E	F	V	R	T	R	T	Y	Y	P	Q	L	G	.	L	I	Q	L	F	D	.	.	.	.	.	.	.	.	.	.	.	G	E	H	L	A	.	.	L	I	D	P	L	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	W	S
Query Conservation																					.							.	.	.	.	.	.	.	.	.	.	.						.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.							.	.	.	.	.	.	.	.	.	.	.						.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	I	L	D	F	E	T	T	S	D	A	A	N	Q	D	Y	P	C	E	V	I	Q	F	A	I	V	A	Y	D	V	P	N	D	K	I	R	E	D	I	S	F	N	K	Y	V	K	P	V	L	N	R	T	L	T	K	N	C	V	D	F	T	G	I	P	Q	R	S	I	D	T	A	D	T	F	D	V	V	Y	E
Template Known Secondary structure													T	T			S															T	T	T	T													B		S	S			S																		T	S		B
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		65	.	.	.	.	70	.	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.								110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure														.	.	.	.																	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Query SS confidence														.	.	.	.																	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Query Sequence		P	L	K	A	I	L	R	D	P	S	I	T	.	.	.	.	K	F	L	H	A	G	S	E	D	L	E	V	F	L	N	V	.	.	.	.	.	.	.	.	F	G	E	L	P	Q	P	L	I	D	T	Q	I	L	A	A	F	.	.	.	.	.	.	.	C	G	R	P	M	S	W	G	F	A	S	M	V	E	E	Y
Query Conservation														.	.	.	.																	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Alig confidence														.	.	.	.																	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	F	Q	Q	W	L	I	T	L	G	L	E	E	G	K	F	A	F	V	C	D	S	R	Q	D	L	W	R	I	A	Q	Y	Q	M	K	L	S	N	I	Q	M	P	A	F	F	R	Q	Y	I	N	L	Y	K	I	F	T	N	E	M	D	R	M	G	P	K	E	L	S	A	T	T	N	I	G	K	M	N	E	Y	Y
Template Known Secondary structure														T	T	S						S	S	S					T									T	T					G	G	G	S																									S									T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	V	T	L	D	K	S	E	S	R	T	D	W	L	A	R	P	L	T	E	R	Q	C	E	Y	A	A	A	D	V	W	Y	L	L	P	I	T	A	K	L	M	V	E
Query Conservation
Alig confidence		.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	D	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	G	R	A	H	D	A	M	D	D	C	L	N	I	A	T	I	L	Q	R	M	I	N	M
Template Known Secondary structure		.	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S		T	T																			T
Template Predicted Secondary structure		.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			171	.	.																.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions