Job Description P09155 Confidence 98.23% Date Thu Jan 5 11:02:04 GMT 2012 Rank 28 Aligned Residues 134 % Identity 21% Template c2p1jB_ PDB info PDB header:transferase Chain: B: PDB Molecule:dna polymerase iii polc-type; PDBTitle: crystal structure of a polc-type dna polymerase iii2 exonuclease domain from thermotoga maritima Resolution 2.50 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60																															.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	A	I	A	L	D	T	E	F	V	R	T	R	T	Y	Y	P	Q	L	G	L	I	Q	L	F	D	G	E	H	L	A	L	I	D	P	L	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	W	S	P	L	K	A	I	L	R	D
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation																																																																																	.
Template Sequence		T	F	V	V	L	D	F	E	T	T	G	L	D	P	Q	V	D	E	I	I	E	I	G	A	V	K	I	Q	G	G	Q	I	V	D	E	Y	H	T	L	I	K	P	S	R	E	I	S	R	K	S	S	E	I	T	G	I	T	Q	E	M	L	E	N	K	R	S	I	E	E	V	L	P	E	F	L	G	F	L	E	.
Template Known Secondary structure											S	S	S		T	T	T													T	T													S	S																		T	T																S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.						.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.
Query SS confidence																								.	.	.	.	.
Query Sequence		P	S	I	T	K	F	L	H	A	G	S	E	D	L	E	V	F	L	N	V	F	G	.	.	.	.	.	E	L	P	Q	P	L	I	D	T	Q	I	L	A	A	F	C	G	R	P	M	S	W	G	F	A	S	M	V	E	E	Y	S	G	V	T	L	D	K	S	E	S	R	T	D	W	L	A	R	P	L	T	E	R
Query Conservation																								.	.	.	.	.
Alig confidence		.																						.	.	.	.	.																													.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																							.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	D	S	I	I	V	A	H	N	A	N	F	D	Y	R	F	L	R	L	W	I	K	K	V	M	G	L	D	W	E	R	P	Y	I	D	T	L	A	L	A	K	S	L	L	K	L	R	S	Y	S	L	D	S	V	V	.	E	K	L	G	L	G	P	F	R	H	H	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	S						T	T																																						S									.				T							S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.																																																							.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.		490	.	.	.	.	.	.	.	.	.	500
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	C	E	Y	A	A	A	D	V	W	Y	L	L	P	I	T	A	K	L	M	V	E	T	E	A	S	G	W
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	R	A	L	D	D	A	R	V	T	A	Q	V	F	L	R	F	V	E	M	M	K	K	E	G	H
Template Known Secondary structure		.	.	.																				T	T	S	T	T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					501	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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