Job Description P09155 Confidence 51.45% Date Thu Jan 5 11:02:04 GMT 2012 Rank 68 Aligned Residues 131 % Identity 10% Template c2ex3I_ PDB info PDB header:transferase/replication Chain: I: PDB Molecule:dna polymerase; PDBTitle: bacteriophage phi29 dna polymerase bound to terminal protein Resolution 3.00 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		P	A	I	A	L	D	T	E	F	V	R	T	R	T	Y	Y	P	Q	L	G	L	I	Q	L	F	D	G	E	H	L	A	L	I	D	P	L	G	I	T	D	W	S	P	L	K	A	I	L	R	D	P	S	I	T	K	F	L	H	A	G	S	E	D	L	E	V	F	L	N	V	F	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																.																						.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation																.																						.	.
Template Sequence		K	M	Y	S	C	A	F	E	T	T	T	K	V	E	.	D	C	R	V	W	A	Y	G	Y	M	N	I	E	D	H	S	E	Y	K	I	G	.	.	N	S	L	D	E	F	M	A	W	V	L	K	V	Q	A	D	L	Y	F	H	N	L	K	F	A	G	A	F	I	I	N	W	L	E	R	N	G	F	K	W	S	A
Template Known Secondary structure														S	S	.	S											S	S		T	T						.	.	S														S					S	S															T	T					S
Template Predicted Secondary structure																.																						.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
																																		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.				.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	L	P	Q	P	L	I	D	T	Q	I	L	A	A	F	C	G	R	P	M	S	W	G	F	A	S	M	V	E	E	Y	S	G	V	T	L	D	K	S	E	.	.	.	S	R	T	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.											.										.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.											.
Template Sequence		D	G	L	P	N	T	Y	N	T	I	I	S	R	M	G	Q	W	Y	M	I	D	I	C	L	G	Y	K	G	K	R	K	I	H	T	V	I	Y	D	S	L	K	K	L	.	.	.	.	.	.	.	.	.	.	P	F	P	V	K	K	I	A	K	D	.	F	K	L	T	V	L	K	G	D	I	D	Y	H	K	E	R
Template Known Secondary structure		S			T	T								T	T														T	T														S	.	.	.	.	.	.	.	.	.	.		S									.	T	T					S	S				S	S	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.											.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	L	A	R	P	L	T	E	R	Q	C	E	Y	A	A	A	D	V	W	Y	L	L	P	I	T	A	K	L	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	G	Y	K	I	T	P	E	E	Y	A	Y	I	K	N	D	I	Q	I	I	A	E	A	L	L	I	Q	F
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions