Job Description P09155 Confidence 81.72% Date Thu Jan 5 11:02:04 GMT 2012 Rank 62 Aligned Residues 130 % Identity 19% Template c1zbhA_ PDB info PDB header:hydrolase/rna Chain: A: PDB Molecule:3'-5' exonuclease eri1; PDBTitle: 3'-end specific recognition of histone mrna stem-loop by 3'-2 exonuclease Resolution 3.00 Å

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		24	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60																																	.	.	.	.	.
Predicted Secondary structure											.	.	.	.															.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.															.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	A	L	D	T	E	F	V	.	.	.	.	R	T	R	T	Y	Y	P	Q	L	G	L	I	Q	L	.	.	F	D	G	E	H	L	A	L	I	D	P	L	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	W	S	P
Query Conservation											.	.	.	.															.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.															.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	C	I	I	D	F	E	A	T	C	E	E	G	N	P	P	E	F	V	H	E	I	I	E	F	P	V	V	L	L	N	T	H	T	L	E	I	E	D	T	F	Q	Q	Y	V	R	P	E	I	N	T	Q	L	S	D	F	C	I	S	L	T	G	I	T	Q	D	Q	V	D	R	A	D	T	F	P	Q	V	L	K	K
Template Known Secondary structure													T	T			T	T															T	T	T											B			S	S	S		S																		T	S	B
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.						.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.								.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure														.	.	.	.	.											.								.	.	.	.	.	.	.											.												.
Query SS confidence														.	.	.	.	.											.								.	.	.	.	.	.	.											.												.
Query Sequence		L	K	A	I	L	R	D	P	S	I	T	K	.	.	.	.	.	F	L	H	A	G	S	E	D	L	E	.	V	F	L	N	V	F	G	.	.	.	.	.	.	.	E	L	P	Q	P	L	I	D	T	Q	.	I	L	A	A	F	C	G	R	P	M	S	.	W	G	F	A	S	M	V	E	E	Y	S	G	V	T	L
Query Conservation														.	.	.	.	.											.								.	.	.	.	.	.	.											.												.
Alig confidence														.	.	.	.	.											.								.	.	.	.	.	.	.											.												.										.
Template Conservation																																																																												.
Template Sequence		V	I	D	L	M	K	L	K	E	L	G	T	K	Y	K	Y	S	L	L	T	D	G	S	W	D	M	S	K	F	L	N	I	Q	C	Q	L	S	R	L	K	Y	P	P	F	A	K	K	W	I	N	I	R	K	S	Y	G	N	F	Y	K	V	P	R	S	Q	T	K	L	T	I	M	L	E	K	.	L	G	M	D	Y
Template Known Secondary structure									T	T	B	T	T	T	B							S	S	S					T									T	T	B				G	G	G	S														T			G	G	G		S								.	T	T
Template Predicted Secondary structure																																																																												.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	S	E	S	R	T	D	W	L	A	R	P	L	T	E	R	Q	C	E	Y	A	A	A	D	V	W	Y	L	L	P	I	T	A	K	L	M	V	E
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	C	G	L	D	D	S	K	N	I	A	R	I	A	V	R	M	L	Q	D
Template Known Secondary structure			S		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																			T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		289	290	.	.																.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions