Job Description P0AEQ6 Confidence 3.23% Date Thu Jan 5 11:23:57 GMT 2012 Rank 26 Aligned Residues 93 % Identity 18% Template c3rkoF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	L	S	R	W	E	T	I	R	Y	V	I	L	P	L	A	L	R	R	M	L	P	P	L	G	N	Q	W	I	I	S	I	K	D	T	S	L	F	I	V	I	G	V	A	E	L	T	R	Q	G	Q	E	I	I	A	G	N	F	R	A	L	E	I	W	S	A	V	A	V	F	Y	L	I	I	T	L	V	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	G	S	E	I	E	Q	E	R	Q	W	L	K	P	Q	V	W	I	G	P	A	I	L	S	A	I	M	L	V	V	I	V	Y	A	I	L	G	V	N	D	Q	G	I	D	G	T	P	I	S	A	K	A	V	G	I	T	L	F	G	P	Y	V	L	A	V	E	L	A	S	M	L	L	L	A	G	L	V	V	A
Template Known Secondary structure			S	S	T	T						T	T		S																							T	T	S																				T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	L	R	R	L	E	R	R	M	K	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	H	V	G	R	E	E	R	A	G	E	V	L
Template Known Secondary structure											S	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions