Job Description P0AE37 Confidence 97.41% Date Thu Jan 5 11:22:26 GMT 2012 Rank 42 Aligned Residues 101 % Identity 17% Template c3i9sA_ PDB info PDB header:transferase Chain: A: PDB Molecule:integron cassette protein; PDBTitle: structure from the mobile metagenome of v.cholerae. integron2 cassette protein vch_cass6 Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	I	R	P	V	E	R	S	D	V	S	A	L	M	Q	L	A	S	K	T	G	G	G	L	T	S	L	P	A	N	E	A	T	L	S	A	R	I	E	R	A	I	K	T	W	Q	G	E	L	P	K	S	E	Q	G	Y	V	F	V	L	E	D	S	E	T	G	T	V	A	G	I	C	A	I	E	V	A	V	G
Query Conservation
Alig confidence																																				.	.	.	.	.																								.	.
Template Conservation																																				.	.	.	.	.																								.	.
Template Sequence		V	E	I	K	R	V	D	K	H	H	C	L	D	L	V	G	I	F	I	E	L	E	R	Y	Y	F	G	D	K	A	A	S	E	Q	.	.	.	.	.	D	L	A	N	Y	L	S	H	Q	V	F	S	E	H	S	G	V	K	V	I	A	A	V	.	.	E	H	D	K	V	L	G	F	A	T	Y	T	I	X	F	P
Template Known Secondary structure									G	G	G	G	G	G	G													G	G	G						.	.	.	.	.									T	T	T	S	T	T										.	.		T	T												S
Template Predicted Secondary structure																																				.	.	.	.	.																								.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	D	P	W	Y	N	Y	R	V	G	T	L	V	H	A	S	K	E	L	N	V	Y	N	A	L	P	T	L	F	L	S	N	D	H	T	G	S	S	E	L	C	T	L	F	L	D	P	D	W	R	K	E	G	N	G	Y	L	L
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	G	Q	X	Y	X	K	D	L	F	V	S	S	S	A	R	G	K	G	I	G	L	Q	L
Template Known Secondary structure			G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G													G	G	G	T	T	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.																																.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions