Return to main results Retrieve Phyre Job Id

Job DescriptionP0AE37
Confidence97.77%DateThu Jan 5 11:22:26 GMT 2012
Rank20Aligned Residues96
% Identity18%Templatec3fynA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:integron gene cassette protein hfx_cass3; PDBTitle: crystal structure from the mobile metagenome of cole2 harbour salt marsh: integron cassette protein hfx_cass3
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  IRPVERSDVSALMQLASKTGGGLTSLPANEATLSARIERAIKTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAVGLN
Query Conservation 


    

  
  

  

 
 



 
   
  

  
  

          






  

 




 
 
  
  
Alig confidence 




















.



















.......










..

















Template Conservation 

 

  
   
  
      .                    .......        
  ..    


           
Template Sequence  VRTAHIGDVPVLVRLXSEFYQ. EAGFALPHDAAIRAFKALLG. . . . . . . KPDLGRIWLIA. . EGTESVGYIVLTLGFSXE
Template Known Secondary structure 

GGG.TT



.......
GGG..TTTT
Template Predicted Secondary structure 

.




.......




..









Template SS confidence 















































































   5....10.........20..... ....30.........40..... ....50...... ...60.........70....
 
   84.....90.........100.........110.........120.........130.........140
Predicted Secondary structure 























Query SS confidence 
























































Query Sequence  DPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLL
Query Conservation   


 


 
  


  
 
      
 
  
 

 


 



 
  
    
 

Alig confidence 

...............................























Template Conservation    ...............................     
  
 
 
  

 


  
Template Sequence  YG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GLRGFVDDFFVRPNARGKGLGAAA
Template Known Secondary structure  TT...............................
GGGTTSS
Template Predicted Secondary structure 

...............................





Template SS confidence 
























































   75. ...80.........90.........100
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions