Job Description P0AE37 Confidence 97.30% Date Thu Jan 5 11:22:26 GMT 2012 Rank 51 Aligned Residues 137 % Identity 17% Template c3eo4A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein mj1062; PDBTitle: the crystal structure of a domain from methanocaldococcus jannaschii2 dsm 2661 Resolution 2.19 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		M	V	I	R	P	V	E	R	S	D	V	S	A	L	M	Q	L	.	.	.	.	A	S	K	T	G	G	G	L	T	S	L	P	A	N	E	A	T	L	S	A	R	I	E	R	A	I	K	T	W	Q	G	E	L	P	K	S	E	Q	G	Y	V	F	V	L	E	D	S	E	T	G	T	V	A	G	I	C	A	I	E
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																									.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Sequence		I	I	I	R	Q	I	T	D	N	D	L	E	L	L	X	A	W	R	S	N	P	L	I	Y	K	F	F	Y	I	Q	K	E	P	L	K	W	E	E	H	Y	S	W	W	X	S	.	.	.	.	.	.	.	.	.	R	E	N	R	V	D	W	I	I	L	L	R	E	N	N	T	I	R	K	V	G	.	.	.	.	.
Template Known Secondary structure									G	G	G									T						T	T	S	T	T			S														.	.	.	.	.	.	.	.	.			S											T	T							.	.	.	.	.
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.										.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	V	G	L	N	D	P	W	Y	N	Y	R	V	G	T	L	V	H	A	S	K	E	L	N	V	Y	N	A	L	P	T	L	F	L	S	N	D	H	T	G	S	S	E	L	C	T	L	F	L	D	P	D	W	R	K	E	G	N	G	Y	L	L	S	K	S	R	F	M	F	M	A	A	F	R	D	K	F	N	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	N	V	S	Q	L	N	T	D	N	P	E	I	G	I	L	I	G	E	F	F	L	W	G	K	H	I	G	R	H	S	V	S	.	.	.	L	V	L	K	W	L	K	N	I	G	Y	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S	S	S									S	T	T	S	T	T	S	S								.	.	.									T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template SS confidence
																																	418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.				.	.	.	.	.	.	.	.	460	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	V	A	E	M	R	G	V	I	D	E	H	G	Y	S	P	F	W	Q	S	L	G	K	R	F	F	S	M	D	F	S	R	A	D	F	L	C	G	T	G	Q	K	A	F	I	A	E	L	M	P	K	H	P	I	Y	T	H	F	L	S	Q	E	A	Q	D	V	I	G	Q	V	H	P	Q	T	A	P	A	R	A
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	I	L	E	N	N	I	R	S	I	K
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		464	.	.																																																																		.	.	.	470	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	E	K	E	G	F	R	Y	R	N	Y	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	E	S	L	G	F	K	K	T	K	K	G	R
Template Known Secondary structure						T	T								S
Template Predicted Secondary structure
Template SS confidence
		479	480	.	.	.	.	.	.	.	.	.	490	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions