Job Description P0AE37 Confidence 61.29% Date Thu Jan 5 11:22:26 GMT 2012 Rank 169 Aligned Residues 33 % Identity 12% Template c1zc1A_ PDB info PDB header:protein turnover Chain: A: PDB Molecule:ubiquitin fusion degradation protein 1; PDBTitle: ufd1 exhibits the aaa-atpase fold with two distinct2 ubiquitin interaction sites Resolution UNK

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		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	L	V	R	T	D	P	A	T	E	R	L	I	L	T	A	A	Q	L	D	A	L	K	C	H	A	G	D	R	V	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	V	L	E	F	I	A	E	E	G	R	V	Y	L	P	Q	W	M	M	E	T	L	G	I	Q	P	G	S	L	L	Q	I
Template Known Secondary structure										S	S														T			T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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