|   |
453 | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | Q | W | Q | Q | V | S | L | N | A | L | V | E | E | T | L | V | L | V | Q | T | A | G | V | Q | A | R | V | D | F | I | S | E | L | D | N | E | L | S | P | I | N | A | D | R | E | L | L | K | Q | V | L | L | N | I | L | I | N | A | V | Q | A | I | S | A | R | G | K | I | R | I | Q | T | W | Q | Y | S | D | S | Q |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|
|   |
|
|
|   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Template Conservation |   |
|
|   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   | . | . | . |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |
|
|
|   |
|
|
|   |   |   |   |   | . |   |   |
|   |   |   |   |   |   |   |   |   | . |   |
Template Sequence |   |
D | D | H | V | P | V | D | I | T | D | L | L | D | R | A | A | H | D | A | A | R | I | Y | P | D | L | D | V | S | L | V | . |
. |
. |
P | S | P | T | C | I | I | V | G | L | P | A | G | L | R | L | A | V | D | N | A | I | A | N | A | V | K | H | G | G | A | . |
T | L | V | Q | L | S | A | V | S | S | R | A | . |
G |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|  |  |  |  |
| . | . | . | S |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| . | S |  |  |  |  |  |  |  |  |  | T | T | . |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  | . | . | . |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |  |  |  |
|
|
| . |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
299 | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | |
|
|
330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | |
. | . | . | . | . | . | . | . | . | 370 | . | . | |
. |
  |
  |   |
533 | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | I | S | I | E | D | N | G | C | G | I | D | L | S | L | Q | K | K | I | F | D | P | F | F | T | T | K | A | S | G | T | G | L | G | L | A | L | S | Q | R | I | I | N | A | H | Q | G | D | I | R | V | A | S | L | P | G | Y | G | A | T | F | T | L | I | L | P | I | N | P |
Query Conservation |   |
  |   |
|   |
|   |
|   |
|   |
|
|   |   |
|   |   |   |   |
|
|
|   |
|   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |
|   |
|   |
|   |
|   |   |
|   |
|
|   |
|   |
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |
| . | . | . | . | . | . | . | . |
|
|
|
|   |
|   |   |   |
|   |   |   |   |
|
|   |
|   |
|   |
|   |   |   |   |
|
|   |   |   |
|   |
|
|
|
|   |
Template Sequence |   |
V | E | I | A | I | D | D | N | G | S | G | V | P | E | G | E | R | Q | V | V | F | E | R | F | . |
. |
. |
. |
. |
. |
. |
. |
S | L | G | L | A | L | V | A | Q | Q | A | Q | L | H | G | G | T | A | S | L | E | N | S | P | L | G | G | A | R | L | V | L | R | L | P | G | P | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | S | S | S |
|
|
| G | G | G |  |  |  |  |  | T | S |
| . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| T | T | S | S |  |  |  |  |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
374 | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . |
  |