 |
Job Description | Q06067 | Confidence | 98.42% | Date | Thu Jan 5 12:33:25 GMT 2012 |
Rank | 41 | Aligned Residues | 97 |
% Identity | 23% | Template | d1kija2 |
SCOP info | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
| ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
| DNA gyrase/MutL, N-terminal domain
|
Resolution | 2.30 |
|
 |
  |   |
496 | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 560 | . | |
|
|
|
|
|
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |
|
|
|
|  |  |
|
|
| . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
Query Sequence |   |
D | R | E | L | L | K | Q | V | L | L | N | I | L | I | N | A | V | Q | A | I | S | A | R | G | K | I | R | I | Q | T | W | Q | Y | S | D | S | Q | Q | A | I | S | I | E | D | N | G | C | G | I | D | L | S | L | Q | K | K | . |
. |
. |
. |
. |
. |
. |
. |
I | F | D | P | F | F | T | T | K | A | . |
. |
. |
. |
. |
. |
Query Conservation |   |
|   |   |   |
|   |   |
|
|   |
|
|
|   |
|
|
|   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|
|   |   |
|   |   |   |   | . | . | . | . | . | . | . | . |
|
|
|   |
|   |   |   |   |   | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |   |   |
|
|   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |   |   |   |
|
|   |
|   |
|   |
|   |   |   |   | . | . |   |
|   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |
Template Sequence |   |
G | V | E | G | Y | H | H | L | F | K | E | I | L | D | N | A | V | D | E | A | L | A | G | Y | A | T | E | I | L | V | R | L | N | E | D | G | . |
. |
S | L | T | V | E | D | N | G | R | G | I | P | V | D | L | M | P | E | E | G | K | P | A | V | E | V | I | Y | N | T | L | H | S | G | G | K | F | E | Q | G | A | Y |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|  |  |  |  |  |  |
| T | T | S | . | . |
|  |  |  |  |  |
| S | S |
|
|
|
| S |  |  | T | T | T | T |  |  |  |  |  |  |  |  |  | S | S |
|
|
| S | G | G | G | G | S | S |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
. | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
562 | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
S | G | T | G | L | G | L | A | L | S | Q | R | I | I | N | A | H | Q | G | D | I | R | V | A | S | L | P | G | Y | G | A | T | F | T | L | I |
Query Conservation |   |
. | . | . | . |   |
|
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |
|   |
|   |
|   |
|   |   |
|   |
|
|   |
|   |
|   |
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |
|   |
|
|   |   |
|   |   |   |
|   |   | . | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | V | S | G | G | L | H | G | V | G | A | S | V | V | N | A | L | S | E | W | . |
. |
. |
T | V | V | E | V | F | R | E | G | K | H | H | R | I | A | F | S |
Template Known Secondary structure |   |
|
|
| S |
| S | S | T | T | S |  |  |  |  |  |  | T |  |  |  | . | . | . |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|