Return to main results Retrieve Phyre Job Id

Job DescriptionQ06067
Confidence98.26%DateThu Jan 5 12:33:25 GMT 2012
Rank49Aligned Residues112
% Identity16%Templatec3luqC_
PDB info PDB header:transferaseChain: C: PDB Molecule:sensor protein; PDBTitle: the crystal structure of a pas domain from a sensory box2 histidine kinase regulator from geobacter sulfurreducens to3 2.5a
Resolution2.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   260.........270.........280.........290.........300.........310... ......320.........330.......
Predicted Secondary structure 































..





Query SS confidence 





















































. .























Query Sequence  TRTLNDLIIENAADGVIAIDRQGDVTTMNPAAEVITGYQRHELVGQPYSMLFDN. . TQFYSPVLDTLEHGTEHVALEISF
Query Conservation                 
   
    
           
                 ..                        
Alig confidence 





















































..























Template Conservation 

 
   
 
     
   
  
 
   
       
                                      
    
Template Sequence  SDERLRLFTEHAPAALAXFDREXRYLAVSRRWREDYGLGDGDILGXSHYDIFPEIGEEWKSVHRRGLAGEVIRVEEDCFV
Template Known Secondary structure 
T
SSTT
B
TT

SS

TT
B
S


TT

Template Predicted Secondary structure 














































Template SS confidence 















































































   87..90.........100.........110.........120.........130.........140.........150.........160......
 
   338.340.........350.........360.........370.
Predicted Secondary structure 












Query SS confidence 

































Query Sequence  PGRDRTIELSVTTSRIHNTHGEMIGALVIFSDLT
Query Conservation                                    
Alig confidence 

































Template Conservation     
          

 
  
   
      


Template Sequence  RADGRTQWLRWEVRPWYEGEGRVGGVVIFTEDIT
Template Known Secondary structure 
TTSS
TTS


Template Predicted Secondary structure 













Template SS confidence 

































   167..170.........180.........190.........200
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions