Job Description Q06067 Confidence 55.72% Date Thu Jan 5 12:33:25 GMT 2012 Rank 141 Aligned Residues 147 % Identity 7% Template c3lifA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:putative diguanylate cyclase (ggdef) with pas/pac domain; PDBTitle: crystal structure of the extracellular domain of the putative2 histidine kinase rphk1s-z16 Resolution 2.70 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.							.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																													.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.
Query Sequence		G	R	S	A	V	L	S	E	K	E	K	K	L	S	A	V	V	N	L	L	N	Q	A	L	G	D	R	Y	D	L	Y	I	D	L	P	R	E	E	R	I	R	A	L	.	.	.	.	.	.	N	A	E	L	A	P	I	T	E	N	I	T	H	A	F	P	G	I	G	A	G	Y	Y	N	K	M	L	D	A	I	I
Query Conservation																																													.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.
Template Conservation
Template Sequence		S	H	K	I	A	L	A	Q	S	E	T	E	X	R	N	L	S	H	S	L	A	E	H	A	T	H	T	F	Q	G	A	D	V	V	L	D	D	I	V	S	F	X	K	W	R	P	H	P	S	P	V	F	N	E	R	L	R	A	L	A	D	N	L	P	Q	L	S	D	V	A	I	L	D	A	D	G	Q	L	T	Y
Template Known Secondary structure																																													T		S	S			T														T	T									T	T	S	B
Template Predicted Secondary structure
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		T	Y	A	P	S	A	L	Y	Q	N	N	V	G	V	T	I	A	A	D	H	P	G	R	E	V	M	R	T	N	T	P	L	V	Y	S	G	R	Q	V	R	G	D	I	L	N	S	M	L	P	I	E	R	.	N	G	E	I	L	G	Y	I	W	A	N	E	L	T	E	D	I	R	R	Q	A
Query Conservation																																																						.
Alig confidence																																																						.
Template Conservation
Template Sequence		A	S	V	K	P	V	P	A	L	D	N	S	D	R	S	Y	F	R	Y	H	R	A	N	D	D	H	T	L	L	I	T	G	P	I	Q	S	R	T	S	G	V	W	V	F	V	V	S	R	R	L	E	T	T	D	G	K	F	F	G	V	V	V	A	T	I	E	S	E	Y	F	S	T	F	Y
Template Known Secondary structure			S	S	S	S					B		T	T	S																							T	T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions