Job Description Q06067 Confidence 33.48% Date Thu Jan 5 12:33:25 GMT 2012 Rank 145 Aligned Residues 148 % Identity 12% Template c3libA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:hypothetical sensory transduction histidine kinase; PDBTitle: crystal structure of the extracellular domain of the putative2 histidine kinase mmhk1s-z3 Resolution 2.99 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																									.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	S	A	V	L	S	E	K	E	K	K	L	S	A	V	V	N	L	L	N	Q	A	L	G	D	R	Y	D	L	Y	I	D	L	P	R	E	E	R	I	.	.	R	A	L	N	A	E	L	A	P	I	T	E	N	I	T	H	A	F	P	G	I	G	A	G	Y	Y	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																									.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	K	L	A	Y	Q	Q	S	V	E	M	A	S	N	Y	A	N	Q	F	D	A	D	M	K	A	N	L	A	I	A	R	T	I	S	T	T	M	E	S	Y	E	T	A	D	R	D	E	A	L	L	I	L	E	N	L	L	R	D	N	P	H	L	L	G	T	Y	V	A	F	E	P	D	A	F	D	G	K	D	A	E
Template Known Secondary structure																																											S																T		T	T		S							S	T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
										105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																											.
Query SS confidence		.	.	.	.	.	.	.	.																																											.
Query Sequence		.	.	.	.	.	.	.	.	N	K	M	L	D	A	I	I	T	Y	A	P	S	A	L	Y	Q	N	N	V	G	V	T	I	A	A	D	H	P	G	R	E	V	M	R	T	N	T	P	L	V	Y	.	S	G	R	Q	V	R	G	D	I	L	N	S	M	L	P	I	E	R	N	G	E	I	L	G	Y	I	W	A	N
Query Conservation		.	.	.	.	.	.	.	.																																											.
Alig confidence		.	.	.	.	.	.	.	.																																											.
Template Conservation
Template Sequence		Y	T	N	S	P	A	H	D	G	T	G	R	F	V	P	Y	W	N	K	M	N	G	T	A	S	V	A	P	L	L	H	Y	D	S	S	D	Y	Y	Q	L	P	K	A	T	E	K	D	V	L	T	E	P	Y	F	Y	E	G	V	F	M	V	S	Y	V	S	P	I	M	K	E	G	E	F	A	G	I	G	G	V	D
Template Known Secondary structure			T	T	S	T	T			T	T										T	T	S	S							S		T	T	T	S											S										T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	T	E	D	I	R	R	Q	A	W	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	L	E	Y	V	D	E	V	V	S	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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