Job Description Q06067 Confidence 98.78% Date Thu Jan 5 12:33:25 GMT 2012 Rank 36 Aligned Residues 90 % Identity 27% Template c3h4lB_ PDB info PDB header:dna binding protein, protein binding Chain: B: PDB Molecule:dna mismatch repair protein pms1; PDBTitle: crystal structure of n terminal domain of a dna repair protein Resolution 2.50 Å

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		500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560													.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	Q	V	L	L	N	I	L	I	N	A	V	Q	A	I	S	A	R	G	K	I	R	I	Q	T	W	Q	Y	S	D	S	Q	Q	A	I	S	I	E	D	N	G	C	G	I	D	L	S	L	Q	K	K	I	F	D	P	F	F	T	T	K	.	.	.	.	.	.	.	.	.	.	.	.	A	S	G	T	G	L	G
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.													.	.																												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.													.	.
Template Sequence		L	T	T	A	V	K	E	L	V	D	N	S	I	D	A	N	A	N	.	.	Q	I	E	I	I	F	K	D	Y	G	L	E	.	.	S	I	E	C	S	D	N	G	D	G	I	D	P	S	N	Y	E	F	L	A	L	K	H	Y	T	S	K	I	A	K	F	Q	D	V	A	K	V	Q	T	L	G	F	R	G	E	A
Template Known Secondary structure																T	T		S	.	.								G	G	G	T	S	.	.								S					T	T	T	G	G	G	S	S									T	T	S	S						T	T	S	S			S	S
Template Predicted Secondary structure																				.	.													.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	L	S	Q	R	I	I	N	A	H	Q	G	D	I	R	V	A	S	L	P	G	Y	G	A	T	F	T	L	I	L
Query Conservation
Alig confidence									.	.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		L	S	S	L	C	G	I	.	.	.	.	.	A	K	L	S	V	I	T	T	T	S	P	P	K	A	D	K	L	E	Y
Template Known Secondary structure								S	.	.	.	.	.	S								S	S	T	T
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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