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Job DescriptionQ06067
Confidence96.62%DateThu Jan 5 12:33:25 GMT 2012
Rank120Aligned Residues141
% Identity11%Templatec3gecA_
PDB info PDB header:circadian clock proteinChain: A: PDB Molecule:period circadian protein; PDBTitle: crystal structure of a tandem pas domain fragment of2 drosophila period
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   257..260.........270.........280.........290.........300.........310.........320.........330..
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Query Sequence  LRETRTLNDLIIENAADGVIAIDRQGDVTTMNPAAEVITGYQRHELVGQPYSMLFDNTQFYSPVLDTLEHGTEHVA. . . .
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Template Sequence  KSSYKVPDEILSQKSPKFAIRHTATGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGAS
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   333......340.........350...... ...360.........370.........380.........390.......
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Query Sequence  . . . . LEISFPGRDRTIELSVTTSRIHNT. HGEMIGALVIFSDLTARKETQRRMAQAERLATLGELMAGVA
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Template Sequence  FCSKPYRFLIQNGCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQGPKQCNVFEAAPTCKLKISEEAQSRN
Template Known Secondary structure 
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TTTT
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   454.....460.........470.........480.........490.........500.........510.........520...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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