Job Description Q06067 Confidence 95.56% Date Thu Jan 5 12:33:25 GMT 2012 Rank 126 Aligned Residues 143 % Identity 16% Template c3e4pB_ PDB info PDB header:transferase Chain: B: PDB Molecule:c4-dicarboxylate transport sensor protein dctb; PDBTitle: crystal structure of malonate occupied dctb Resolution 2.30 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.									.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.
Query Sequence		V	L	S	E	K	E	K	K	L	S	A	V	V	N	L	L	N	Q	A	L	G	D	R	Y	D	L	Y	I	D	L	P	R	E	E	R	I	R	A	L	.	.	.	.	.	.	.	.	N	A	E	L	A	P	I	T	E	N	I	T	H	A	F	P	G	I	G	A	G	Y	Y	N	K	M	L	D	A	I	I	T	Y
Query Conservation																																									.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	G	Q	S	R	I	D	A	S	L	K	A	S	L	L	R	A	V	V	E	R	Q	R	A	L	P	L	V	L	A	D	D	A	A	I	R	G	A	L	L	S	P	D	R	P	S	L	D	R	I	N	R	K	L	E	A	L	A	T	S	A	E	A	A	V	I	Y	L	I	D	R	S	G	V	A	V	A	A	S
Template Known Secondary structure																																T	T										S																					T		S							T	T	S	B					T
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		A	P	S	A	L	Y	Q	N	N	V	G	V	T	I	A	A	D	H	P	G	R	E	V	M	R	T	N	T	P	L	.	V	Y	S	G	R	Q	V	R	G	D	I	L	N	S	M	L	P	I	E	R	N	G	E	I	L	G	Y	I	W	A	N	E	L	T	E	D	I	R	R	Q	A	W
Query Conservation																																.
Alig confidence		.																														.
Template Conservation		.
Template Sequence		.	N	W	Q	E	P	T	S	F	V	G	N	D	Y	A	F	R	D	Y	F	R	L	A	V	R	D	G	M	A	E	H	F	A	M	G	T	V	S	K	R	P	G	L	Y	I	S	R	R	V	D	G	P	G	G	P	L	G	V	I	V	A	K	L	E	F	D	G	V	E	A	D	W	Q
Template Known Secondary structure		.	T	T	T	S	T	T			T	T		B		T	T											S									T	T	T														T	T
Template Predicted Secondary structure		.
Template SS confidence
			137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions