Job Description Q06067 Confidence 90.18% Date Thu Jan 5 12:33:25 GMT 2012 Rank 132 Aligned Residues 145 % Identity 11% Template c3c8cB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:methyl-accepting chemotaxis protein; PDBTitle: crystal structure of mcp_n and cache domains of methyl-2 accepting chemotaxis protein from vibrio cholerae Resolution 1.50 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	S	A	V	L	S	E	K	E	K	K	L	S	A	V	V	N	L	L	N	Q	A	L	G	D	R	Y	D	L	Y	I	D	L	P	R	E	E	R	I	R	A	L	N	A	E	L	A	P	I	T	E	N	I	T	H	A	F	P	G	I	G	A	G	Y	Y	N	K	M	L	D	A	I	I	T	Y	A	P	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	S	X	V	S	D	S	V	D	E	I	V	D	G	V	S	K	T	T	A	E	V	I	N	G	R	K	S	I	A	Q	Y	A	T	S	L	I	E	N	N	P	E	P	D	N	V	R	T	I	I	S	Q	P	L	I	K	N	T	F	L	L	V	G	F	G	L	E	K	D	G	S	N	I	N	N	D	P	S	W
Template Known Secondary structure																																																					S	S								S							T	T	T	S					S		T	T
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																													.	.	.																				.	.
Query SS confidence																													.	.	.																				.	.
Query Sequence		L	Y	Q	N	N	V	G	V	T	I	A	A	D	H	P	G	R	E	V	M	R	T	N	T	P	L	V	.	.	.	Y	S	G	R	Q	V	R	G	D	I	L	N	S	M	L	P	I	E	R	.	.	N	G	E	I	L	G	Y	I	W	A	N	E	L	T	E	D	I	R	R	Q	A
Query Conservation																													.	.	.																				.	.
Alig confidence							.	.																					.	.	.																				.	.
Template Conservation							.	.
Template Sequence		N	P	G	P	T	.	.	W	D	P	R	V	R	P	W	Y	K	D	A	K	N	A	G	K	L	V	I	T	A	P	Y	A	D	S	A	S	G	E	I	L	V	S	V	A	T	P	V	K	D	S	A	T	G	Q	F	L	G	S	I	F	Y	D	V	S	L	A	E	L	A	E	L	V
Template Known Secondary structure					T	T	.	.			G	G	G	S										S	S										T	T	T														T	T	T
Template Predicted Secondary structure							.	.
Template SS confidence
		142	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions