Job Description Q06067 Confidence 96.40% Date Thu Jan 5 12:33:25 GMT 2012 Rank 121 Aligned Residues 146 % Identity 14% Template c3by9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of the v. cholerae histidine kinase dctb2 sensor domain Resolution 1.70 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.										.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.
Query Sequence		T	E	G	R	S	A	V	L	S	E	K	E	K	K	L	S	A	V	V	N	L	L	N	Q	A	L	G	D	R	Y	D	L	Y	I	D	L	P	R	E	E	R	I	R	A	L	.	.	.	.	.	.	.	.	.	N	A	E	L	A	P	I	T	E	N	I	T	H	A	F	P	G	I	G	A	G	Y	Y	N	K	M
Query Conservation																																															.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	F	Q	Y	Q	A	L	L	N	E	H	Q	S	Q	L	D	R	F	S	S	H	I	V	A	T	L	D	K	Y	A	H	I	P	H	L	I	S	K	D	K	E	L	V	D	A	L	L	S	A	Q	N	S	A	Q	I	D	I	T	N	R	Y	L	E	Q	V	N	E	V	I	Q	A	A	D	T	Y	L	I	D	R	F
Template Known Secondary structure		G	G	G																								T	T	T	T	T							T										T	T	T																				T		S							T	T
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		L	D	A	I	I	T	Y	A	P	S	A	L	Y	Q	N	N	V	G	V	T	I	A	A	D	H	P	G	R	E	V	M	R	T	N	T	P	L	.	V	Y	S	G	R	Q	V	R	G	D	I	L	N	S	M	L	P	I	E	R	N	G	E	I	L	G	Y	I	W	A	N	E	L	T	E	D	I	R	R
Query Conservation																																							.
Alig confidence									.																														.
Template Conservation									.
Template Sequence		G	N	T	I	A	S	S	.	N	W	N	L	D	R	S	F	I	G	R	N	F	A	W	R	P	Y	F	Y	L	S	I	A	G	Q	K	S	Q	Y	F	A	L	G	S	T	S	G	Q	R	G	Y	Y	Y	A	Y	P	V	I	Y	A	A	E	I	L	G	V	I	V	V	K	X	D	L	S	A	I	E	Q
Template Known Secondary structure		S	B					T	.	T	T	T	S	T	T			T	T		B		T	T	S							T	T	T	S									T	T	T														T	T												S
Template Predicted Secondary structure									.
Template SS confidence
		108	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions