Return to main results Retrieve Phyre Job Id

Job DescriptionQ06067
Confidence97.18%DateThu Jan 5 12:33:25 GMT 2012
Rank111Aligned Residues117
% Identity16%Templatec3bwlA_
PDB info PDB header:transferaseChain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of pas domain of htr-like protein from haloarcula2 marismortui
Resolution1.73 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   252.......260.........270.........280.........290.........300.........310.........320..... ....
Predicted Secondary structure 








































..


Query SS confidence 









































































. .



Query Sequence  NLAQALRETRTLNDLIIENAADGVIAIDRQGDVTTMNPAAEVITGYQRHELVGQPYSMLFDNTQFYSPVLDTLE. . HGTE
Query Conservation                         
   
    
           
                             ..    
Alig confidence 









































































..



Template Conservation   

  
  

   
 
 
     
   
  
     
       
                                   
Template Sequence  RREKRLEETSSRLEALFENSPDXIDVLDADGTICEVNQRFCAELGYDESEVLGRSIWEFDLXFDAEDVQTQLSGFSVDER
Template Known Secondary structure 
SS
TT
B
T

GGGTTTSBGGGTBTT

T

TT
Template Predicted Secondary structure 
























Template SS confidence 















































































   390.........400.........410.........420.........430.........440.........450.........460.........
 
   330.........340.........350.........360.........370
Predicted Secondary structure 













Query SS confidence 








































Query Sequence  HVALEISFPGRDRTIELSVTTSRIHNTHGEMIGALVIFSDL
Query Conservation                                           
Alig confidence 






























..







Template Conservation     
       
   

      
       ..      

Template Sequence  RKFEGLYERRDGSTXSVEVHLLRFNLEGEDR. . FLAISRDI
Template Known Secondary structure 
TTS
TT..
Template Predicted Secondary structure 






..
Template SS confidence 








































   470.........480.........490.........500 ........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions